Table 3.
Characteristics of genome-deduced proteomes (all from NCBI*) from mammals used in this work.
| Species | Order levels | Family | Abbreviation | Common name | Genome size (Mb) | Total number of sequences1 |
|---|---|---|---|---|---|---|
| Aotus nancymaae | Simiformes, Platyrrhini | Aotidae | AOTNAN | Ma's night monkey | 2862 | 30,849 |
| Callithrix jacchus | Simiformes, Platyrrhini | Cebidae | CALJAC | White-tufted-ear marmoset | 2733 | 31,373 |
| Carlito syrichta | Tarsiiformes | Tarsiidae | CARSYR | Philippine tarsier | 3454 | 26,764 |
| Cebus capucinus | Simiformes, Platyrrhini | Cebidae | CEBCAP | White-faced sapajou | 2718 | 35,515 |
| Cercocebus atys | Simiformes, Catarrhini | Cercopithecidae | CERATY | Sooty mangabey | 2848 | 38,743 |
| Chlorocebus sabaeus | Simiformes, Catarrhini | Cercopithecidae | CHLSAB | Green monkey | 2790 | 38,532 |
| Colobus angolensis | Simiformes, Catarrhini | Cercopithecidae | COLANG | Angolan colobus | 2970 | 28,757 |
| Gorilla gorilla | Simiformes, Catarrhini | Hominidae | GORGOR | Western gorilla | 3074 | 31,611 |
| Homo sapiens | Simiformes, Catarrhini | Hominidae | HOMSAP | Human | 3096 | 54,793 |
| Macaca fascicularis | Simiformes, Catarrhini | Cercopithecidae | MACFAS | Crab-eating macaque | 2947 | 36,852 |
| Macaca mulatta | Simiformes, Catarrhini | Cercopithecidae | MACMUL | Rhesus monkey | 3097 | 34,238 |
| Macaca nemestrina | Simiformes, Catarrhini | Cercopithecidae | MACNEM | Pig-tailed macaque | 2949 | 37,815 |
| Mandrillus leucophaeus | Simiformes, Catarrhini | Cercopithecidae | MANLEU | Drill | 3062 | 28,631 |
| Microcebus murinus | Lemuriformes | Cheirogaleidae | MICMUR | Gray mouse lemur | 2487 | 33,966 |
| Nomascus leucogenys | Simiformes, Catarrhini | Hylobatidae | NOMLEU | White-cheeked gibbon | 2962 | 28,771 |
| Otolemur garnettii | Lorisiformes | Galagidae | OTOGAR | Small-eared galago, or Bushbaby | 2520 | 25,278 |
| Pan paniscus | Simiformes, Catarrhini | Hominidae | PANPAN | Pigmey chimpanzee | 3287 | 31,623 |
| Pan troglodytes | Simiformes, Catarrhini | Hominidae | PANTRO | Chimpamzee | 2892 | 45,468 |
| Papio anubis | Simiformes, Catarrhini | Cercopithecidae | PAPANU | Olive baboon | 2959 | 39,065 |
| Piliocolobus tephrosceles | Simiformes, Catarrhini | Cercopithecidae | PILTEP | Ugandan red Colobus | 2923 | 33,549 |
| Pongo abelli | Simiformes, Catarrhini | Hominidae | PONABE | Sumatran orangutan | 3253 | 32,655 |
| Propithecus coquereli | Lemuriformes | Indiidae | PROCOC | Coquerel's sifaka | 2798 | 23,684 |
| Rhinopithecus bieti | Simiformes, Catarrhini | Cercopithecidae | RHIBLE | Black snub-nosed Monkey | 2977 | 32,121 |
| Rhinopithecus roxellana | Simiformes, Catarrhini | Cercopithecidae | RHIROX | Golden snub-nosed monkey | 2900 | 28,672 |
| Saimiri boliviensis boliviensis | Simiformes, Platyrrhini | Cebidae | SAIBOL | Bolivian squirrel monkey | 2609 | 26,794 |
| Tupaia chinensis (outgroup) | Euarchontoglires, Scadentia | Tupailidae | TUPCHI | Chinese tree shrew | 2847 | 27,162 |
| Mus musculus (outgroup) | Euarchontoglires, Rodentia | Muridae | MUSMUS | Common mouse | 2654 | 76,190 |
* https://www.ncbi.nlm.nih.gov/genome ; protein sequences were retrieved from RefSeq database.
1. After clusterization at 99% and removal of sequences smaller than 50 aa.