Table 2.
Results of miRNA prediction with the combined approach of SVM classification and homology-based identification.
| Homologous miRNAa | Probabilityb | E-valuec |
|---|---|---|
| mdm-MIR10978a | 0.9954324 | 1.00E−20 |
| mdm-MIR10979 | 0.99519524 | 6.00E−29 |
| mdm-MIR10981a | 0.99531038 | 1.00E−11 |
| mdm-MIR10981b | 0.99699497 | 9.00E−13 |
| mdm-MIR10981c | 0.99998466 | 1.00E−11 |
| mdm-MIR10981d | 0.9952244 | 4.00E−11 |
| mdm-MIR10982c | 0.99562967 | 1.00E−21 |
| mdm-MIR10985 | 0.99575234 | 2.00E−23 |
| mdm-MIR10990 | 0.99624388 | 2.00E−14 |
| mdm-MIR10991e | 0.99572793 | 9.00E−13 |
| mdm-MIR10993a | 0.99548501 | 2.00E−13 |
| mdm-MIR10993b | 0.99591172 | 1.00E−11 |
| mdm-MIR10993f. | 0.99683035 | 2.00E−13 |
| mdm-MIR10995 | 0.99678045 | 2.00E−14 |
| mdm-MIR11000 | 0.99545193 | 2.00E−13 |
| mdm-MIR11002a | 0.99541374 | 2.00E−19 |
| mdm-MIR11006 | 0.99526081 | 1.00E−11 |
| mdm-MIR11007 | 0.99557012 | 4.00E−11 |
| mdm-MIR11008 | 0.99528467 | 4.00E−16 |
| mdm-MIR11009 | 0.99734578 | 1.00E−15 |
| mdm-MIR11014 | 0.99552524 | 1.00E−11 |
| mdm-MIR11015 | 0.99547712 | 4.00E−11 |
| mdm-MIR159d | 0.9961144 | 1.00E−25 |
| mdm-MIR164d | 0.99998259 | 4.00E−11 |
| mdm-MIR3627c | 0.99623606 | 9.00E−13 |
| mdm-MIR3627d | 0.99520933 | 4.00E−16 |
| mdm-MIR396f. | 0.9951471 | 2.00E−13 |
| mdm-MIR399b | 0.99565726 | 1.00E−15 |
| pla-MIR11602 | 0.99565912 | 4.00E−26 |
| vvi-MIR171a | 0.99652471 | 4.00E−11 |
| vvi-MIR171g | 0.99608369 | 5.00E−15 |
| gma-MIR5032 | 0.99616243 | 4.00E−16 |
| gma-MIR5368 | 0.99628882 | 5.00E−15 |
apre-miRNA records from miRBase. mdm: Malus domestica; pla: Paeonia lactiflora; vvi: Vitis vinifera; gma: Glycine max.
bTrained SVM classifier probability value.
cE-value threshold applied for the BLAST analysis.