Table 4.
Spike mutations located within the RBD (AA 330–530) with at least two cases in the population and non-zero GBPM average score in the ACE2/Spike interaction models.
GBPM | |||||
---|---|---|---|---|---|
Mutation | Position | Abundance | Frequency | Average score | Quartile |
S477N | 477 | 16,547 | 0.055995 | –18.61 | Q2 |
N439K | 439 | 5587 | 0.018906 | –11.81 | Q2 |
N501Y | 501 | 4921 | 0.016653 | –63.3975 | Q1 |
Y453F | 453 | 917 | 0.003103 | –0.8825 | Q4 |
E484K | 484 | 352 | 0.001191 | –5.4375 | Q3 |
K417N | 417 | 260 | 0.00088 | –13.925 | Q2 |
S477I | 477 | 157 | 0.000531 | –18.61 | Q2 |
G446V | 446 | 58 | 0.000196 | –9.6475 | Q3 |
F490S | 490 | 53 | 0.000179 | –18.07 | Q2 |
S477R | 477 | 49 | 0.000166 | –18.61 | Q2 |
N501T | 501 | 47 | 0.000159 | –63.3975 | Q1 |
L455F | 455 | 44 | 0.000149 | –14.3075 | Q2 |
G476S | 476 | 43 | 0.000146 | –18.3675 | Q2 |
E484Q | 484 | 43 | 0.000146 | –5.4375 | Q3 |
A475V | 475 | 35 | 0.000118 | –54.45 | Q1 |
F486L | 486 | 34 | 0.000115 | –42.1525 | Q1 |
F490L | 490 | 18 | 6.09E-05 | –18.07 | Q2 |
YQ505WK | 505 | 14 | 4.74E-05 | –28.835 | Q1 |
Q493L | 493 | 12 | 4.06E-05 | –60.8475 | Q1 |
V503F | 503 | 9 | 3.05E-05 | –4.09 | Q3 |
E484A | 484 | 8 | 2.71E-05 | –5.4375 | Q3 |
G446S | 446 | 7 | 2.37E-05 | –9.6475 | Q3 |
E484D | 484 | 4 | 1.35E-05 | –5.4375 | Q3 |
Q493* | 493 | 4 | 1.35E-05 | –60.8475 | Q1 |
Y505W | 505 | 4 | 1.35E-05 | –28.835 | Q1 |
G476A | 476 | 3 | 1.02E-05 | –18.3675 | Q2 |
S477G | 477 | 3 | 1.02E-05 | –18.61 | Q2 |
F456L | 456 | 2 | 6.77E-06 | –31.21 | Q1 |
V503I | 503 | 2 | 6.77E-06 | –4.09 | Q3 |
Y449F | 449 | 2 | 6.77E-06 | –19.3075 | Q1 |
The asterisk (*) indicates a stop codon. A lower GBPM score indicates a stronger effect in the ACE2/Spike interaction.