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. 2021 Feb 8:1–14. doi: 10.1080/08927022.2021.1880576

Table 3.

Interactions of COVID-19 Main Protease (PDB ID:6LU7) amino acid residues with ligands at receptor sites.

Ligands Binding affinity, ΔG (kcal/mol) Amino acids involved and Distance (A°)
Hydrogen binding interactions Hydrophobic interactions
Quadranoside III −8.6 LYS A:137 (4.60), ASN A:238 (4.52), GLU A:288 (4.82) LEU A:272 (4.46)
Luteolin-7-glucoside-3′-glucuronide −8.5 PHE A:219 (5.16), ASN A:221 (3.75, 3.78, 4.67), ASP A:263 (3.50, 3.90) LEU A:220 (4.22)
Melitric acid A −8.2 GLN A:110 (4.80, 5.234), ASN A:151 (4.23), ILE A:249 (3.34) VAL A:104 (7.12), ILE A:106 (5.62), PHE A:294 (4.40), PRO A:293 (4.44), ILE A:249 (4.77)