TABLE 4.
Common hub lncRNAs of WGCNA and topological analysis in the yellow and blue modules.
Symbol | Module | WGCNA |
Topological analysis |
Limma analysis |
|||||||
GS | GS P-value | MM | MM P-value | LncRNA betweenness | LncRNA closeness | lncRNA degree | Log2FC | FDR | Up or Down | ||
LOC100505854 | Yellow | −0.8217 | 0.00031 | 0.9739 | 4.3E-09 | 8422.938722 | 4.25E-04 | 1030 | −1.8039 | 1.48E-11 | Down |
LOC148413 | Yellow | −0.8343 | 0.00021 | 0.96687 | 1.8E-08 | 6322.04946 | 4.17E-04 | 983 | −4.5227 | 2.06E-13 | Down |
LOC100505771 | Yellow | −0.9462 | 3.1E-07 | 0.98214 | 4.5E-10 | 11642.66986 | 3.88E-04 | 806 | −4.1625 | 3.43E-14 | Down |
LOC728769 | Yellow | −0.8604 | 7.9E-05 | 0.96763 | 1.5E-08 | 2256.936121 | 3.76E-04 | 733 | −1.8701 | 6.79E-11 | Down |
LOC728431 | Yellow | −0.9084 | 7E-06 | 0.97579 | 2.8E-09 | 3033.478056 | 3.76E-04 | 719 | −3.5328 | 1.92E-12 | Down |
LOC100130815 | Blue | 0.88305 | 2.9E-05 | 0.90683 | 7.7E-06 | 12665.77631 | 0.000440723 | 459 | 6.85512 | 6.2E-14 | Up |
LOC100288077 | Blue | 0.8565 | 9.2E-05 | 0.93155 | 1.3E-06 | 972.4226098 | 0.000378931 | 99 | 5.05612 | 3.8E-12 | Up |
LOC339260 | Blue | 0.86325 | 7E-05 | 0.94982 | 2.1E-07 | 22755.95494 | 0.00043956 | 453 | 5.23495 | 1.2E-11 | Up |
LOC390705 | Blue | 0.87677 | 3.9E-05 | 0.93408 | 1E-06 | 77322.16426 | 0.000528262 | 833 | 6.02721 | 3E-13 | Up |