Table 2. Results from CP Models at the Significance Level 0.3a.
descriptors | validation set | validity steatotic class | validity nonsteatotic class | efficiency | sensitivity | specificity | BA | MCC |
---|---|---|---|---|---|---|---|---|
RDKit | TR | 0.73 | 0.72 | 0.69 | 0.62 | 0.59 | 0.61 | 0.14 |
TS | 0.74 | 0.71 | 0.75 | 0.67 | 0.61 | 0.64 | 0.18 | |
5 selected RDKit | TR | 0.77 | 0.73 | 0.71 | 0.67 | 0.61 | 0.64 | 0.18 |
TS | 0.76 | 0.79 | 0.71 | 0.67 | 0.7 | 0.69 | 0.24 | |
ToxPrint | TR | 0.77 | 0.71 | 0.71 | 0.67 | 0.59 | 0.63 | 0.17 |
TS | 0.71 | 0.69 | 0.74 | 0.63 | 0.57 | 0.6 | 0.13 | |
transporter prediction | TR | 0.86 | 0.72 | 0.41 | 0.76 | 0.28 | 0.52 | 0.03 |
TS | 0.88 | 0.76 | 0.44 | 0.82 | 0.43 | 0.62 | 0.18 | |
NR prediction | TR | 0.76 | 0.72 | 0.52 | 0.57 | 0.46 | 0.52 | 0.02 |
TS | 0.79 | 0.74 | 0.5 | 0.61 | 0.48 | 0.54 | 0.06 | |
RDKit + ToxPrint | TR | 0.78 | 0.73 | 0.69 | 0.68 | 0.61 | 0.64 | 0.19 |
TS | 0.74 | 0.71 | 0.82 | 0.71 | 0.65 | 0.68 | 0.24 | |
RDKit + transporter prediction | TR | 0.73 | 0.73 | 0.69 | 0.63 | 0.6 | 0.62 | 0.16 |
TS | 0.74 | 0.71 | 0.77 | 0.69 | 0.62 | 0.65 | 0.2 | |
RDKit + NR prediction | TR | 0.74 | 0.72 | 0.69 | 0.65 | 0.6 | 0.62 | 0.16 |
TS | 0.76 | 0.74 | 0.73 | 0.71 | 0.63 | 0.67 | 0.23 | |
ToxPrint + transporter prediction | TR | 0.78 | 0.71 | 0.72 | 0.7 | 0.6 | 0.65 | 0.2 |
TS | 0.74 | 0.69 | 0.77 | 0.67 | 0.6 | 0.63 | 0.17 | |
ToxPrint + NR prediction | TR | 0.8 | 0.73 | 0.69 | 0.71 | 0.61 | 0.66 | 0.2 |
TS | 0.68 | 0.71 | 0.76 | 0.61 | 0.62 | 0.61 | 0.15 | |
transporter prediction + NR prediction | TR | 0.8 | 0.72 | 0.54 | 0.61 | 0.48 | 0.55 | 0.06 |
TS | 0.79 | 0.69 | 0.6 | 0.73 | 0.47 | 0.6 | 0.14 | |
RDKit + ToxPrint + transporter prediction | TR | 0.81 | 0.71 | 0.69 | 0.72 | 0.58 | 0.65 | 0.2 |
TS | 0.74 | 0.72 | 0.82 | 0.71 | 0.65 | 0.68 | 0.24 | |
RDKit + transporter prediction + NR prediction | TR | 0.77 | 0.74 | 0.67 | 0.67 | 0.61 | 0.64 | 0.18 |
TS | 0.71 | 0.73 | 0.76 | 0.67 | 0.64 | 0.65 | 0.21 | |
ToxPrint + transporter prediction + NR prediction | TR | 0.79 | 0.71 | 0.71 | 0.71 | 0.59 | 0.65 | 0.20 |
TS | 0.71 | 0.70 | 0.80 | 0.66 | 0.62 | 0.64 | 0.18 | |
RDKit + ToxPrint + NR prediction | TR | 0.76 | 0.71 | 0.73 | 0.66 | 0.61 | 0.63 | 0.17 |
TS | 0.74 | 0.74 | 0.79 | 0.69 | 0.67 | 0.68 | 0.24 | |
RDKit + ToxPrint + transporter prediction + NR prediction | TR | 0.78 | 0.72 | 0.7 | 0.65 | 0.61 | 0.63 | 0.17 |
TS | 0.74 | 0.73 | 0.8 | 0.7 | 0.65 | 0.68 | 0.23 |
Performances on training set (TR) and test set (TS) are shown. BA is balanced accuracy, and MCC is Matthews correlation coefficient.