Table 1.
Summary of the results for all primer/probe sets. Shown are the number of primers/probes for each set, the range of reference temperatures , the range of strict and partially mismatched coverages, for SARS-CoV-2, SARS-CoV-1 and non-SARS genomes. Detailed results for each primer are shown in Supplementary Tables S5, S6 and S7.
| Name of Set | (∘C) | SARS-CoV-2 |
SARS-CoV-1 |
non-SARS |
||||
|---|---|---|---|---|---|---|---|---|
| (%) | (%) | (%) | (%) | (%) | (%) | |||
| CDC [2] | 6 | 61.1–75.5 | 98.4–99.3 | 99.1–99.4 | 0.0–80.0 | 0.0–80.0 | 0.0 | 0.0 |
| WHO [1] | 21 | 51.3–70.3 | 97.9–99.4 | 97.9–99.5 | 0.0 | 0.0 | 0.0 | 0.0 |
| Luminex [3] | 6 | 59.4–81.0 | 64.9–99.5 | 65.1–99.5 | 0.0 | 0.0–100 | 0.0 | 0.0 |
| Jalali et al [8]. | 6 | 61.3–64.2 | 98.7–99.4 | 98.7–99.4 | 0.0–100 | 0.0–100 | 0.0 | 0.0 |
| Corman et al [4]. | 21 | 61.7–81.7 | 0.0–99.4 | 0.0–99.4 | 0.0–100 | 0.0–100 | 0.0 | 0.0–19.2 |
| Davda et al [5]. | 16 | 56.5–70.3 | 95.3–99.4 | 95.3–99.4 | 0.0–80.0 | 0.0–90 | 0.0 | 0.0 |
| Grant et al [6]. | 2 | 62.4–79.9 | 97.5–99.3 | 97.5–99.5 | 0.0–100 | 0.0–100 | 0.0 | 0.0 |
| Hirotsu et al [7]. | 3 | 60.6–68.8 | 0.0–99.4 | 0.0–99.4 | 0.0 | 0.0 | 0.0 | 0.0 |
| Lanza et al [9]. | 27 | 60.5–75.0 | 98.5–99.4 | 98.8–99.5 | 0.0 | 0.0–90.0 | 0.0 | 0.0 |
| Li et al [10]. | 2 | 67.5–70.4 | 98.2–99.2 | 98.3–99.2 | 0.0 | 0.0–100 | 0.0 | 0.0 |
| Lu et al [11]. | 3 | 64.0–74.7 | 98.6–99.4 | 99.3–99.4 | 0.0 | 0.0 | 0.0 | 0.0 |
| Munnink et al [12]. | 171 | 65.4–74.9 | 45.9–99.5 | 46.0–99.7 | 0.0–100 | 0.0–100 | 0.0 | 0.0–0.639 |
| Nalla et al [13]. | 4 | 51.7–68.0 | 0.0–99.5 | 0.0–99.5 | 0.0–90.0 | 0.0–100 | 0.0–68.7 | 0.0–68.7 |
| Niu et al [14]. | 6 | 59.2–84.2 | 0.0–99.4 | 0.0–99.4 | 0.0–100 | 0.0–100 | 0.0 | 0.0 |
| Park et al [15]. | 20 | 59.3–65.4 | 94.9–99.5 | 94.9–99.5 | 0.0–100 | 0.0–100 | 0.0 | 0.0 |
| Rahman et al [16]. | 6 | 64.2–76.1 | 97.6–99.4 | 97.6–99.4 | 0.0 | 0.0–100 | 0.0 | 0.0 |
| Toptan et al [17]. | 6 | 62.2–65.4 | 98.8–99.5 | 98.8–99.5 | 0.0 | 0.0 | 0.0 | 0.0 |
| Vogels et al [18]. | 11 | 58.6–65.5 | 0.0–99.3 | 0.0–99.3 | 0.0–100 | 0.0–100 | 0.0 | 0.0 |
| Yip et al [19]. | 2 | 61.4–63.4 | 99.1–99.2 | 99.1–99.3 | 0.0 | 0.0 | 0.0 | 0.0 |