Key resources table.
| Reagent type (species) or resource | Designation | Source or reference | Identifiers | Additional information |
|---|---|---|---|---|
| Gene (Homo sapiens) | Homo sapiens Genome Assembly | Ensembl | GRCh38.12 | |
| Biological sample (Homo sapiens) | Primary Cord Blood Mononuclear Cells | Volunteers | UIH Cohort | Demographics reported in Supplementary file 5 |
| Biological sample (Homo sapiens) | Cord Blood Serum | Volunteers | UIH Cohort Project Viva |
Demographics reported in Supplementary files 5 and 7 |
| Commercial assay or kit | Human PGLYRP1/PGRP-S DuoSet ELISA | R and D Systems | DY2590 | |
| Commercial assay or kit | Human IL6Ra DuoSet ELISA | R and D Systems | DY227 | |
| Commercial assay or kit | RNeasy Mini Kit | Qiagen | 74104 | |
| Commercial assay or kit | RNA 6000 Nano Kit | Agilent | 5067–1511 | |
| Commercial assay or kit | Qubit RNA HS Assay Kit | Thermo Fisher Scientific | Q32852 | |
| Commercial assay or kit | TruSeq Stranded mRNA Library Prep Kit | Illumina | 20020594 | |
| Commercial assay or kit | HiSeq × Ten Reagent Kit v2.5 | Illumina | FC-501–2501 | |
| Software, algorithm | R | R | Version 3.6.3 | |
| Software, algorithm | geoquery | Bioconductor | Version: 2.36.0 | |
| Software, algorithm | GeneMeta | Bioconductor | Version: 1.54.0 | |
| Software, algorithm | tximport | Bioconductor | Version: 1.10.1 | |
| Software, algorithm | DESeq2 | Bioconductor | Version: 1.22.2 | |
| Software, algorithm | relaimpo | CRAN | Version: 2.2–3 | |
| Software, algorithm | salmon | Github | Version 0.12.00 | |
| Software, algorithm | GSEA | gsea-msigdb.org | Version 4.0 |