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. 2021 Feb 18;11:4049. doi: 10.1038/s41598-021-83626-x

Table 3.

Interaction result between the selected 4 ligands in complex with the protein XIAP.

Compounds ID Conventional hydrogen bonds Pi donor hydrogen bond Alkyl bond Carbon hydrogen bond Unfavorable donor-donor bond Unfavorable acceptor-acceptor Pi-alkyl bond
ZINC77257307 ASP309 (2.26 Å), THR308 (2.09 Å), GLU314 (2.51 Å) TRP310 (2.98 Å) LYS299 (5.03 Å) TRP323 (4.36 Å, 5.03 Å)
ZINC1070004335 TRP317 (2.6 Å), GLN333 (2.56 Å), GLU332 (2.30 Å) ARG286 (5.38 Å) HIS302 (3.51 Å)
ZINC247950187 ALA263 (2.32 Å), ARG268 (2.08 Å), HIS302 (2.51 Å), GLU332 (2.53 Å, 2.90 Å), ASN255 (3.46 Å, 3.23 Å, 2.98 Å, 3.57 Å) Pi-sigma Pi-pi T shaped ASN255, HIS302 (3.78 Å), GLU332 (3.18 Å) ARG268 (1.60 Å) ALA263 (2.67 Å) ARG286 (4.62 Å, 5.38 Å)
TYR265 (3.67 Å) TYR329 (5.36 Å)
ZINC107434573 ASN249 (2.28 Å), GLY306 (2.48 Å), THR308 (2.54 Å)