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. 2021 Feb 18;4:240. doi: 10.1038/s42003-021-01796-w

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — Pearson correlation was employed to calculate correlation coefficient (r) between bacterial genus pairs based on their relative abundances. Co-occurred pairs with r > 0.7 under FDR-adjusted P < 0.05 were shown and visualized by Cytoscape version 3.8.0. Edges were sized based on r values. The bigger squares or circles were indicators in Figs. 1d and 2d.