Table 4.
Docking scores of anti-RdRP drugs against two active sites with the highest site score and largest size.
No. | Drug name | Docking score of rigid docking. First site | Docking score of rigid docking. Second site | Docking score of induced-fit docking. First site | Docking score of induced-fit docking. Second site |
---|---|---|---|---|---|
1 | Remdesivir | −5.591 | −4.364 | −5.413 | −6.718 |
2 | Favipiravir | −3.827 | −5.179 | −6.323 | −4.822 |
3 | Ribavirin | −5.600 | −6.729 | −6.490 | −6.953 |
4 | Galidesivir | −3.214 | −7.580 | −6.187 | −7.154 |
5 | Tenofovir | −4.397 | −4.994 | −5.241 | −5.795 |
6 | Setrobuvir | −5.052 | −0.705 | −4.601 | −6.088 |
7 | CHEMBL 180948 | −4.073 | −3.622 | −3.598 | −3.870 |
8 | CHEMBLE 221046 | −2.320 | −3.273 | −3.929 | −3.561 |
9 | R1626 | −4.757 | −3.286 | −3.506 | −4.781 |
10 | Sofosbuvir | −5.376 | −4.343 | −6.918 | −6.529 |
11 | Valganciclovir | −5.884 | −6.822 | −6.485 | −5.085 |
12 | Ceftibuten | −4.718 | −5.896 | −6.302 | −5.105 |
13 | Fenoterol | −4.934 | −8.562 | −8.521 | −7.561 |
14 | Fludarabine | −6.401 | −5.299 | −5.937 | −7.042 |
15 | Itraconazole | −4.023 | −1.070 | −6.203 | −5.025 |
16 | Cefuroxime | −4.672 | −5.711 | −4.961 | −6.135 |
17 | Atovaquone | −3.926 | −3.454 | −4.882 | −4.103 |
18 | Chenodeoxycholic acid | −3.189 | −4.807 | −6.113 | −4.951 |
19 | Cromolyn | −6.110 | −4.420 | −5.917 | −4.559 |
20 | Dabigatran etexilate | −5.291 | −3.975 | −6.375 | −6.367 |
21 | Cortisone | −5.298 | −4.088 | −5.110 | −5.820 |
22 | Tibolone | −3.354 | −3.914 | −5.109 | −5.109 |
23 | Novobiocin | −5.203 | −1.010 | −5.492 | −3.407 |
24 | Silybin | −4.922 | −7.786 | −5.625 | −6.997 |
25 | Idarubicin | −6.424 | −8.611 | −7.806 | −7.993 |
26 | Bromocriptine | −3.763 | −4.865 | −6.708 | −6.661 |
27 | Diphenoxylate | −2.878 | −5.486 | −5.273 | −4.528 |
28 | Benzylpenicilloyl G | −5.639 | −4.202 | −5.179 | −6.922 |