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. 2021 Feb 19;12:1157. doi: 10.1038/s41467-021-21426-7

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — a Gene expression from mRNA-seq for HoxA cluster (error bars = SEM, n = 3) in paraxial mesoderm regions. b Genome browser views of ATAC-seq profile across the HoxA cluster. ATAC and RNA profiles are shown in green for PSM, in blue for ES, in yellow for MS and in red for DS. Grey boxes indicate intergenic accessible regions and transcription factor footprints identified within those regions. Genome-wide differential footprinting for (c) HoxA2, (d) HoxA5, (e) HoxA10 and (f) HoxA11 between PSM and DS.