a–c Pearson correlation analysis of the relationship between CDKN2B-AS1, IGF2BP3, and NUF2 levels in TCGA-KIRC dataset (a) and 42 paired KIRC tissues and adjacent normal tissues (b), normal tissues are shown as blue circles and tumor tissues as red circles; the correlation coefficient between each two markers is shown in c. d, e Kaplan–Meier analysis of overall survival and disease-free survival for KIRC patients in TCGA dataset based on the number of upregulated molecular markers; CDKN2B-AS1, NUF2, and IGF2BP3 expression was stratified by the individual medians by RNA-seq data, and the patients were divided into four groups as indicated. f, g ROC curve analysis of overall survival (f) and disease-free survival (g) for CDKN2B-AS1, NUF2, and IGF2BP3 as individual biomarkers or as a combined panel (containing CDKN2B-AS1, NUF2, and IGF2BP3). h–k ROC curve analysis for CDKN2B-AS1, NUF2, and IGF2BP3 as individual biomarkers or as a combined panel to discriminate KIRC patients with high tumor grades (G3 and G4) from those with low tumor grades (G1 and G2) (h); KIRC patients with stages III and IV from those with stages I and II (i); KIRC patients with distant metastasis from patients without distant metastasis (j), and KIRC patients with lymph node metastasis from patients without lymph node metastasis (k). **p < 0.01, *p < 0.05. l Schematic diagram of the IGF2BP3/CDKN2B-AS1/NUF2 axis regulating tumor growth and metastasis in KIRC cells. CDKN2B-AS1 is stabilized by specifically binding to IGF2BP3 and acts as a modular scaffold of the CBP and SMYD3 epigenetic-modifying complex to increase H3K27ac and H3K4me3 modification in the promoter region of NUF2, thereby enhancing NUF2 transcription, and promoting tumor cell growth and metastasis.