Table 4.

Pairwise SNP distances (number of nucleotide differences) between the Salmonella isolates from contaminated tree nut samples

SAMN04	SAMN04	SAMN05	SAMN04	SAMN05	SAMN04	SAMN04	SAMN04	SAMN04	SAMN04	SAMN05	SAMN05	SAMN04	SAMN06	SAMN04	SAMN04	SAMN06
413829	500976	359991	451262	181543	451264	413830	451260	413828	451261	784536	181544	396122	213901	549535	451263	125464
SAMN04
413829
SAMN04	11,941
500976
SAMN05	140,578	139,559
359991
SAMN04	139,107	137,990	30,754
451262
SAMN05	139,457	138,565	31,101	31,180
181543
SAMN04	139,494	138,608	31,140	31,226	102
451264
SAMN04	141,373	140,259	32,102	31,605	31,101	31,081
413830
SAMN04	141,273	140,163	32,010	31,494	30,945	30,957	614
451260
SAMN04	141,352	140,239	32,042	31,564	31,021	31,007	541	101
413828
SAMN04	139,527	138,320	53,924	53,559	53,735	53,845	55,174	54,971	55,144
451261
SAMN05	140,289	139,405	53,879	53,558	53,434	53,638	55,147	55,016	55,183	42,137
784536
SAMN05	135,986	134,965	44,677	44,396	44,388	44,500	45,674	45,575	45,689	41,309	40,987
181544
SAMN04	139,842	139,003	50,282	50,072	50,298	50,363	51,554	51,445	51,505	47,097	46,844	32,360
396122
SAMN06	139,628	138,793	49,980	49,626	49,954	50,014	51,216	51,115	51,175	46,817	46,437	32,092	279
213901
SAMN04	140,492	139,465	51,139	50,969	50,673	50,738	52,465	52,410	52,492	46,273	45,742	35,321	41,818	41,491
549535
SAMN04	140,514	139,468	51,155	50,925	50,633	50,725	52,502	52,295	52,438	46,287	45,722	35,317	41,872	41,546	92
451263
SAMN06	140,556	139,489	51,243	51,027	50,724	50,810	52,602	52,427	52,550	46,375	45,825	35,378	41,957	41,622	69	53
125464