Table 2. Comparison of the evaluation metrics with the existing predictors on the benchmark datasets.
Predictors | Benchmark Datasets | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
SC_628 | HS_990 | MM_944 | ||||||||||
AC(%) | SN(%) | SP(%) | MCC | AC(%) | SN(%) | SP(%) | MCC | AC(%) | SN(%) | SP(%) | MCC | |
iRNA-PseU [12] | 64.49 | 64.65 | 64.33 | 0.29 | 60.40 | 61.01 | 59.80 | 0.21 | 69.07 | 73.31 | 64.83 | 0.38 |
PseUI [13] | 65.13 | 62.74 | 67.52 | 0.30 | 64.24 | 64.85 | 63.64 | 0.28 | 70.44 | 74.58 | 66.31 | 0.41 |
iPseU-CNN [14] | 68.15 | 66.84 | 69.45 | 0.37 | 66.68 | 65.0 | 68.78 | 0.34 | 71.81 | 74.79 | 69.11 | 0.44 |
XGboost [15] | 68.15 | 66.84 | 69.45 | 0.37 | 65.44 | 63.64 | 67.24 | 0.31 | 72.03 | 76.48 | 67.57 | 0.45 |
iPseU-Layer [16] | 89.34 | 84.68 | 93.76 | 0.79 | 79.70 | 71.18 | 88.22 | 0.60 | 80.08 | 77.92 | 81.82 | 0.60 |
ours(General) | 81.50 | 76.0 | 87.0 | 0.61 | 77.0 | 79.5 | 74.5 | 0.53 | 80.50 | 86.0 | 75.0 | 0.55 |
ours(merged-seq) | 85.85 | 88.29 | 83.37 | 0.72 | 78.83 | 85.61 | 72.07 | 0.59 | 77.23 | 76.62 | 77.60 | 0.54 |