Table 2.

BALB/c MHC class II epitopes in predicted models

Antigenicity score	Percentile rank	Allele	Length	End	Start	Peptide
Model 1
0.3676	0.07	H2-IEd	15	29	43	FASVYAWNRKRISNC
0.4243	0.1	H2-IEd	15	28	42	RFASVYAWNRKRISN
0.3086	0.14	H2-IEd	15	30	44	ASVYAWNRKRISNCV
0.4963	0.14	H2-IEd	15	27	41	TRFASVYAWNRKRIS
0.1089	0.17	H2-IEd	15	130	144	NYNYLYRLFRKSNLK
0.2254	0.17	H2-IEd	15	131	145	YNYLYRLFRKSNLKP
0.3301	0.3	H2-IEd	15	31	45	SVYAWNRKRISNCVA
0.1801	0.36	H2-IEd	15	129	143	GNYNYLYRLFRKSNL
0.0415	0.38	H2-IEd	15	132	146	NYLYRLFRKSNLKPF
0.0814	0.71	H2-IEd	15	133	147	YLYRLFRKSNLKPFE
0.0207	0.74	H2-IEd	15	128	142	GGNYNYLYRLFRKSN
Model 2
0.4243	0.1	H2-IEd	15	42	28	RFASVYAWNRKRISN
0.4614	0.14	H2-Ied	15	534	520	QIGYYRRATRRIRGG
0.4963	0.14	H2-IEd	15	41	27	TRFASVYAWNRKRIS
0.4072	0.27	H2-Ied	15	322	308	FIASFRLFARTRSMW
0.6649	0.27	H2-IEd	15	535	521	IGYYRRATRRIRGGD
0.4424	0.3	H2-IEd	15	323	309	IASFRLFARTRSMWS
0.7304	0.57	H2-Ied	15	324	310	ASFRLFARTRSMWSF
0.7955	0.73	H2-IEd	15	325	311	SFRLFARTRSMWSFN
0.7387	0.94	H2-Ied	15	260	246	LLQFAYANRNRFLYI
0.8634	0.98	H2-IEd	15	416	402	DSGFAAYSRYRIGNY
Model 3
0.4243	0.1	H2-IEd	15	42	28	RFASVYAWNRKRISN
0.4963	0.14	H2-Ied	15	41	27	TRFASVYAWNRKRIS
Model 4
0.4243	0.1	H2-IEd	15	42	28	RFASVYAWNRKRISN
0.4614	0.14	H2-IEd	15	1280	1266	QIGYYRRATRRIRGG
0.4963	0.14	H2-IEd	15	41	27	TRFASVYAWNRKRIS
0.4072	0.27	H2-IEd	15	1068	1054	FIASFRLFARTRSMW
0.6649	0.27	H2-IEd	15	1281	1267	IGYYRRATRRIRGGD
0.4424	0.3	H2-IEd	15	1069	1055	IASFRLFARTRSMWS
0.7304	0.57	H2-IEd	15	1070	1056	ASFRLFARTRSMWSF
0.7955	0.73	H2-IEd	15	1071	1057	SFRLFARTRSMWSFN
0.7387	0.94	H2-IEd	15	1006	992	LLQFAYANRNRFLYI
0.8741	0.98	H2-IEd	15	1162	1148	DSGFAAYSRYRIGNY