Skip to main content
. 2018 Aug 30;59(4):405–417. doi: 10.1007/s13353-018-0459-0

Table 4.

Changes in patterns of cytosine methylation in triticale roots under aluminum stress as determined by MSAP

Transitions Effect Percentage (%) of the bands representing particular effect
NT T
L203 L438 L444 L455 L461 Mean^ L195 L198 L201 L210 L451 Mean^
IV → I DM 1.14 2.05 2.05 1.15 1.15 1.74b 2.27 1.82 1.81 1.83 2.27 1.73b
IV → II DM 1.60 1.60 1.60 1.84 1.84 1.69b 1.59 2.05 1.59 1.83 1.82 1.82b
II → I DM 0.46 0.23 0.23 0.46 0.23 0.32a 0.23 0.45 0.45 0.46 0.23 0.41a
I → IV DNM 0 0 0 0 0 0a 0.23 0.23 0 0 0 0.09a
III → III LCMS 32.49 32.42 32.42 32.64 32.64 32.45d 32.27 32.27 32.20 32.49 32.27 32.38d
II → II LCMS 48.74 48.40 48.40 48.51 48.51 48.45e 48.18 47.95 48.53 48.74 48.18 48.29e
I → I LCMS 15.56 15.30 15.30 15.40 15.40 15.36c 15.23 15.23 15.42 15.56 15.23 15.28c
Total Demethylation DM 3.20 3.88 3.88 3.45 3.45 3.75 4.29 4.32 3.85 4.12 4.32 3.97
Methylation de novo DNM 0 0 0 0 0 0 0.23 0.23 0 0 0 0.09
No change LCMS 96.80 96.12 96.12 96.55 96.55 96.25 95.48 95.45 96.15 95.88 95.68 95.94

DM, demethylation event; DNM, de novo methylation event; LCMS, lack of change in methylation status; T, tolerant lines; NT, non-tolerant lines

LCMS % = 100 × LCMS / (LCMS + DNM + DM); DNM % = 100 × DNM / (LCMS + DNM + DM); DM % = 100 × DM / (LCMS + DNM + DM)

^Means followed by the same letter in the same columns are not significantly different according to Tukey test (α = 0.05)