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. 2021 Feb 23;11:4367. doi: 10.1038/s41598-021-83666-3

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Comparison of the prenylated proteins identified from multinotch SPS-MS3 and MS2-based approaches. (A) Fold-change correlation plot of the prenylated proteins identified from multinotch versus MS2-level quantitative proteomic analyses. A wider dynamic range was observed employing the multinotch approach. (B) Summary of the number of individual prenylated proteins identified from the two approaches. Protein groups were separated into individual proteins. A similar number of proteins were identified with good overlap. (C) Correlation between the enrichment fold-change and relative native abundances of GGTase-I substrates and Rab proteins identified from MS2-based analysis on COS-7 in the presence of statin. No statistically significant correlation was observed.