Table 1.
Independent tandem repeats identified in the S. tora genome.
| No | Name | Analysis tool | Length (bp) | AT (%) | Copy no. | Length (kb)a | GP (%)b | Accession no. |
|---|---|---|---|---|---|---|---|---|
| 1 | StoTR01_86 | TAREAN | 86 | 65 | 313,414 | 26,953.6 | 3.93 | MW143025 |
| 2 | StoTR02_7_tel | TAREAN | 7 | 57 | 2,888,813 | 20,221.7 | 2.95 | MW143031 |
| 3 | StoTR03_178 | TAREAN | 178 | 49 | 85,581 | 15,233.4 | 2.22 | MW143027 |
| 4 | StoTR04_55 | TAREAN | 55 | 71 | 194,692 | 10,708.1 | 1.56 | MW143024 |
| 5 | StoTR05_180 | TAREAN | 180 | 58 | 13,772 | 2,478.9 | 0.36 | MW143028 |
| 6 | StoTR06_159 | TAREAN | 159 | 47 | 14,432 | 2,294.7 | 0.33 | MW143026 |
| 7 | Sto_45S_CDS | TAREAN | 5,833 | 45 | 1,225 | 7,148.2 | 1.04 | MW143033 |
| 8 | Sto_5S | dnaLCW | 181 | 48 | 325 | 87.4 | 0.01 | MW143032 |
a
Length (kb) = copy number × repeat length/1,000.
b
Genome Proportion = length/S. tora genome size (686 Mb) × 100.