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. Author manuscript; available in PMC: 2021 Feb 24.
Published in final edited form as: Methods Enzymol. 2018 Sep 27;615:285–332. doi: 10.1016/bs.mie.2018.08.017

Fig. 12.

Fig. 12

Changes in side-chain conformational entropy for the Lys and Arg side chains of the Egr-1 zinc-finger protein upon binding to the target DNA. (A) Changes in the side-chain conformational entropy of Lys and Arg side chains calculated from 0.6-μs MD trajectories for the free protein and the complex. (B) Correlation between changes in the NMR order parameters and changes in the MD conformational entropy upon complex formation.