Table 1.
Citrus sinensis transcriptome: assembly and annotation status. Annotation type indicates the analysed characteristic of the transcriptome, Amount indicates a size or a number of molecules.
| Annotation type | Amount |
|---|---|
| Total number of transcripts | 49 564 |
| Total size of transcripts | 73 991 731 bp |
| GC% | 41.06 |
| Longest transcript | 16 810 bp |
| Transcripts > 1 kb | 29 599 |
| Mean transcript size | 1493 bp |
| Median transcript size | 1241 bp |
| Blast2GO annotated transcripts | 33 086 |
| GO Terms | 56 655 |
| -Biological process | 18 271 |
| -Cellular component | 12 090 |
| -Molecular function | 26 294 |
| EggNOG annotated transcripts | 35 330 |
| -Unique GO terms | 6265 |
| -Unique KEEG Kos | 3541 |
| -Unique BiGG reactions | 284 |