Table 1. Hub genes for hypomethylated, highly expressed genes ranked in cytoHubba.
Catelogy | Rank methods in cytoHubba | |||||
MCC | MNC | Degree | EPC | Closedness | Radiality | |
Gene symbol top 15 | SPP1 | SPP1 | SPP1 | SPP1 | SPP1 | PECAM1 |
VWF | VWF | VWF | VWF | VWF | SPP1 | |
PECAM1 | PECAM1 | PECAM1 | COL1A1 | PECAM1 | VWF | |
CDH5 | COL1A1 | COL1A1 | PECAM1 | EDN1 | EDN1 | |
TEK | EDN1 | CDH5 | EDN1 | COL1A1 | COL1A1 | |
EDN1 | CDH5 | EDN1 | DCN | CDH5 | CDH5 | |
ANGPT1 | COL3A1 | DCN | CDH5 | DCN | MMP7 | |
COL1A1 | DCN | COL3A1 | MMP1 | MMP7 | DCN | |
SPARCL1 | FOS | MMP1 | COL3A1 | MMP1 | MMP1 | |
CP | MMP1 | FOS | MMP7 | CAV1 | CAV1 | |
GPC3 | TEK | TIMP3 | COMP | COL3A1 | COL3A1 | |
CHRDL1 | THBS2 | SPARCL1 | THBS2 | FOS | FOS | |
WFS1 | TIMP3 | CAV1 | TEK | A2M | ANGPT1 | |
GOLM1 | MMP7 | A2M | ANGPT1 | ANGPT1 | TEK | |
COL3A1 | COMP | TEK | TIMP3 | TEK | A2M |