Table 1. Top ten hypermethylated or hypomethylated lncRNAs.
chrom | txStart | txEnd | GeneName | Foldchange | regulation |
chr21 | 40400925 | 40401053 | AF064858.10 | 1135.5 | hypermethylated |
chr2 | 43256052 | 43256660 | LOC102723854 | 944 | hypermethylated |
chr10 | 13246218 | 13246526 | MCM10 | 650.5 | hypermethylated |
chr8 | 145580221 | 145580373 | FBXL6 | 529.3 | hypermethylated |
chr1 | 31989461 | 31989846 | LINC01226 | 503.3 | hypermethylated |
chr12 | 114204879 | 114204900 | LINC01234 | 468.7 | hypermethylated |
chr11 | 61521500 | 61521917 | DKFZP434K028 | 460 | hypermethylated |
chr15 | 28594381 | 28594740 | RP11-483E23.2 | 451.3 | hypermethylated |
chr3 | 101679229 | 101679575 | RP11-221J22.2 | 330.1 | hypermethylated |
chr3 | 186454327 | 186454439 | RP11-573D15.8 | 295.4 | hypermethylated |
chr14 | 94406121 | 94406460 | ASB2 | 138.3 | hypomethylated |
chr21 | 44188481 | 44188522 | PDE9A | 99.7 | hypomethylated |
chr11 | 68781258 | 68781260 | MRGPRF-AS1 | 77.5 | hypomethylated |
chr16 | 1277701 | 1277790 | TPSB2 | 72.8 | hypomethylated |
chr16 | 10273781 | 10274120 | GRIN2A | 52.9 | hypomethylated |
chr2 | 98967381 | 98967603 | AC092675.4 | 50.9 | hypomethylated |
chr4 | 144465241 | 144465509 | SMARCA5 | 50.2 | hypomethylated |
chr14 | 103606011 | 103606120 | RP11-736N17.4 | 46.1 | hypomethylated |
chr15 | 57982841 | 57983080 | GCOM1 | 39.2 | hypomethylated |
chr10 | 7659681 | 7659940 | ITIH5 | 32.9 | hypomethylated |