Table 2.
Common alternative splicing events in C9(+) presymptomatic and Acute mice
| #Event | symb | Acute ∆psi | Acute P-value | C9(+) ∆psi | C9 (+) P-value |
|---|---|---|---|---|---|
| chr2:38514581:38514658:+@chr2:38514733:38514864:+@chr2:38550553:38550671:+ | Nek6 | -0.38 | 0.03 | -0.16 | 0.02 |
| chr15:93410692:93410783:+@chr15:93420284:93420490:+@chr15:93424014:93424075:+ | Pphln1 | -0.29 | 0.03 | -0.25 | 0.02 |
| chr3:81036416:81037554:+@chr3:81131018:81131076:+@chr3:81141405:81141600:+ | Pdgfc | -0.29 | 0.03 | -0.25 | 0.01 |
| chr2:32244234:32244389:+@chr2:32244786:32244950:+@chr2:32245547:32245677:+ | Pomt1 | -0.28 | 0.03 | -0.21 | 0.01 |
| chr19:40344356:40344439:-@chr19:40340045:40340146:-@chr19:40336986:40337035:- | Sorbs1 | -0.27 | 0.03 | -0.10 | 0.01 |
| chr2:79657147:79658349:+@chr2:79658670:79658846:+@chr2:79660233:79660310:+ | Ssfa2 | -0.26 | 0.03 | -0.15 | 0.02 |
| chr19:4161068:4161215:-@chr19:4159566:4159705:-@chr19:4159403:4159460:- | Rps6kb2 | -0.26 | 0.03 | -0.16 | 0.01 |
| chrX:74018130:74018366:-@chrX:74017901:74018017:-@chrX:74017130:74017511:- | Irak1 | -0.14 | 0.03 | -0.15 | 0.02 |
| chr11:31908825:31908875:+@chr11:31918801:31918824:+@chr11:31920409:31920582:+ | Cpeb4 | -0.24 | 0.03 | -0.16 | 0.03 |
| chr6:29361294:29361487:+@chr6:29361560:29361753:+@chr6:29366040:29366206:+ | Calu | -0.24 | 0.03 | -0.21 | 0.02 |
| chr5:5556065:5556156:-@chr5:5555238:5555406:-@chr5:5546353:5546405:- | Gtpbp10 | 0.11 | 0.03 | 0.12 | 0.03 |
| chr8:127409556:127409707:+@chr8:127410729:127410773:+@chr8:127415570:127415797:+ | Pard3 | -0.24 | 0.03 | -0.19 | 0.01 |
| chr17:56686006:56686061:+@chr17:56692521:56692721:+@chr17:56696602:56696638:+ | Ranbp3 | -0.23 | 0.03 | -0.20 | 0.03 |
| chr7:27507947:27508103:+@chr7:27515251:27515447:+@chr7:27516040:27520041:+ | Prx | -0.23 | 0.03 | -0.19 | 0.03 |
| chr6:112644588:112644747:-@chr6:112628462:112628524:-@chr6:112619851:112620904:- | Rad18 | -0.20 | 0.03 | -0.20 | 0.03 |
| chr6:149310322:149310377:+@chr6:149324732:149324800:+@chr6:149325405:149329784:+ | 2810474O19Rik | -0.20 | 0.03 | -0.15 | 0.04 |
| chr15:34117880:34118110:+@chr15:34121423:34121512:+@chr15:34123668:34123766:+ | Mtdh | -0.18 | 0.03 | -0.13 | 0.02 |
| chr2:124298575:124298655:+@chr2:124400243:124400365:+@chr2:124489985:124490012:+ | Sema6d | 0.12 | 0.03 | 0.12 | 0.03 |
| chr16:59618795:59618850:-@chr16:59618666:59618678:-@chr16:59613321:59613844:- | Arl6 | -0.18 | 0.03 | -0.17 | 0.03 |
| chr17:15499888:15500024:+@chr17:15501154:15501202:+@chr17:15502962:15503128:+ | Tbp | -0.18 | 0.03 | -0.17 | 0.03 |
| chr16:3984991:3987176:-@chr16:3982979:3983242:-@chr16:3981585:3981687:- | Slx4 | -0.15 | 0.03 | -0.14 | 0.01 |
| chr2:22957018:22957118:-@chr2:22950184:22950270:-@chr2:22946576:22946761:- | Abi1 | 0.16 | 0.03 | 0.17 | 0.03 |
| chr18:12862107:12862713:-@chr18:12841184:12841346:-@chr18:12819505:12819661:- | Osbpl1a | -0.15 | 0.03 | -0.11 | 0.01 |
| chr10:19904563:19904713:-@chr10:19894725:19894802:-@chr10:19894250:19894358:- | Pex7 | -0.14 | 0.03 | -0.10 | 0.03 |
| chr1:193362013:193362133:-@chr1:193361580:193361667:-@chr1:193359719:193359847:- | Camk1g | -0.14 | 0.03 | -0.14 | 0.02 |
| chr13:58160152:58160238:+@chr13:58162838:58162881:+@chr13:58163433:58164693:+ | Idnk | -0.14 | 0.03 | -0.11 | 0.03 |
| chr8:69744461:69744587:-@chr8:69744192:69744252:-@chr8:69742859:69743269:- | Zfp963 | 0.11 | 0.03 | 0.11 | 0.02 |
| chrX:50573224:50573351:-@chrX:50573015:50573141:-@chrX:50569277:50570291:- | Firre | 0.15 | 0.03 | 0.13 | 0.02 |
| chr5:5557213:5557406:-@chr5:5555238:5555382:-@chr5:5547927:5548000:- | Gtpbp10 | 0.15 | 0.03 | 0.11 | 0.04 |
| chr16:87914154:87914404:-@chr16:87896809:87896895:-@chr16:87895897:87896351:- | Grik1 | -0.18 | 0.03 | -0.20 | 0.03 |
| chr14:47704187:47704277:+@chr14:47704420:47704488:+@chr14:47705763:47705800:+ | Ktn1 | 0.16 | 0.03 | 0.10 | 0.03 |
| chr10:14760289:14760710:+@chr10:14766677:14767025:+@chr10:14770155:14770556:+ | Nmbr | -0.12 | 0.03 | -0.17 | 0.02 |
| chr11:4118625:4118729:-@chr11:4116681:4116756:-@chr11:4111894:4111937:- | Sec14l2 | 0.17 | 0.03 | 0.12 | 0.03 |
| chr19:4811172:4811634:-@chr19:4793926:4794009:-@chr19:4792398:4792820:- | Gm21992 | 0.18 | 0.03 | 0.14 | 0.04 |
| chr17:56011866:56011962:+@chr17:56012271:56012492:+@chr17:56014941:56015109:+ | Mpnd | 0.18 | 0.03 | 0.15 | 0.03 |
| chr4:91260761:91260986:-@chr4:91254141:91254179:-@chr4:91250767:91253570:- | Elavl2 | 0.19 | 0.03 | 0.12 | 0.03 |
| chrX:71376887:71376910:+@chrX:71379014:71379064:+@chrX:71383200:71383275:+ | Mtmr1 | 0.21 | 0.03 | 0.19 | 0.03 |
| chr17:85615594:85615743:-@chr17:85614648:85614727:-@chr17:85609090:85611748:- | Six3os1 | -0.17 | 0.03 | -0.25 | 0.01 |
| chr7:96694770:96695025:+@chr7:96702642:96702740:+@chr7:96703926:96704161:+ | Tenm4 | 0.17 | 0.03 | 0.19 | 0.01 |
| chr6:42350946:42351148:+@chr6:42351270:42351362:+@chr6:42351475:42351969:+ | Zyx | 0.22 | 0.03 | 0.20 | 0.01 |
| chr8:3606267:3606406:+@chr8:3606504:3606820:+@chr8:3607791:3607890:+ | Camsap3 | 0.22 | 0.03 | 0.17 | 0.03 |
| chr5:140713053:140713172:+@chr5:140714293:140714384:+@chr5:140714567:140714685:+ | Brat1 | 0.23 | 0.03 | 0.23 | 0.01 |
| chr11:102224734:102224955:-@chr11:102219145:102219281:-@chr11:102218416:102218781:- | Hdac5 | 0.26 | 0.03 | 0.18 | 0.03 |
| chr15:99319131:99319254:-@chr15:99318918:99319017:-@chr15:99317223:99318372:- | Fmnl3 | 0.26 | 0.03 | 0.14 | 0.04 |
| chr2:124298575:124298655:+@chr2:124400243:124400364:+@chr2:124489985:124490012:+ | Sema6d | 0.11 | 0.03 | 0.18 | 0.02 |
| chr5:32785549:32785626:-@chr5:32774396:32774466:-@chr5:32764773:32764948:- | Pisd | -0.12 | 0.03 | -0.17 | 0.04 |
| chrX:60295189:60295292:-@chrX:60293607:60293657:-@chrX:60292319:60292383:- | Atp11c | 0.27 | 0.03 | 0.17 | 0.04 |
| chr7:4010466:4010503:-@chr7:4010251:4010300:-@chr7:4007073:4009834:- | Lair1 | 0.30 | 0.03 | 0.15 | 0.03 |
| chr4:21746656:21746774:+@chr4:21747483:21747576:+@chr4:21748137:21750546:+ | Ccnc | 0.30 | 0.03 | 0.21 | 0.02 |
| chr2:157560448:157560535:+@chr2:157561213:157561293:+@chr2:157561542:157562519:+ | Nnat | 0.31 | 0.03 | 0.17 | 0.02 |
| chr19:12577090:12577170:+@chr19:12583923:12584122:+@chr19:12586835:12589696:+ | Fam111a | 0.31 | 0.03 | 0.17 | 0.04 |
| chr17:94747617:94748417:-@chr17:94743932:94743994:-@chr17:94740386:94740755:- | Mettl4 | 0.38 | 0.03 | 0.24 | 0.01 |
| chr12:101082451:101084025:+@chr12:101084284:101084499:+@chr12:101088042:101088927:+ | D130020L05Rik | -0.17 | 0.03 | -0.30 | 0.01 |
| chr6:145211170:145211244:+@chr6:145214522:145214784:+@chr6:145215184:145215271:+ | Etfrf1 | 0.37 | 0.03 | 0.26 | 0.03 |
| chr7:73514090:73514151:-@chr7:73507806:73507913:-@chr7:73504988:73505128:- | Chd2 | -0.23 | 0.03 | -0.15 | 0.03 |
| chr10:128645721:128645993:-@chr10:128643875:128643968:-@chr10:128642629:128642733:- | Ikzf4 | -0.31 | 0.03 | -0.16 | 0.04 |
| chr8:85841002:85841103:+@chr8:85843021:85843112:+@chr8:85875634:85875723:+ | Phkb | -0.15 | 0.03 | -0.16 | 0.02 |
| chr18:59062381:59062562:+@chr18:59065835:59065885:+@chr18:59072193:59072417:+ | A730017C20Rik | -0.20 | 0.03 | -0.20 | 0.03 |
| chr7:123179717:123179859:+@chr7:123180249:123180395:+@chr7:123180540:123180677:+ | Tnrc6a | -0.34 | 0.03 | -0.19 | 0.04 |
| chr11:95046921:95047046:-@chr11:95046449:95046590:-@chr11:95044482:95045763:- | Itga3 | 0.26 | 0.03 | 0.22 | 0.03 |
| chrX:135751945:135752017:+@chrX:135796142:135796336:+@chrX:135797553:135797629:+ | Gprasp1 | -0.24 | 0.03 | -0.08 | 0.04 |
| chr4:118234959:118235103:-@chr4:118231486:118231791:-@chr4:118230695:118230888:- | Ptprf | 0.18 | 0.03 | 0.05 | 0.04 |
| chr16:45408856:45409053:-@chr16:45400222:45400303:-@chr16:45396969:45397295:- | Cd200 | -0.15 | 0.03 | -0.04 | 0.02 |
| chr2:71228600:71228690:+@chr2:71233649:71233708:+@chr2:71235915:71236030:+ | Dync1i2 | -0.15 | 0.03 | -0.06 | 0.03 |
| chrX:151835224:151835292:+@chrX:151836222:151836329:+@chrX:151840056:151840154:+ | Huwe1 | -0.13 | 0.03 | -0.04 | 0.03 |
| chr9:31157695:31157847:-@chr9:31156190:31156225:-@chr9:31153414:31153499:- | Aplp2 | -0.12 | 0.03 | -0.04 | 0.03 |
| chr3:146458743:146458840:+@chr3:146459679:146459840:+@chr3:146463899:146465771:+ | Ctbs | 0.14 | 0.03 | 0.06 | 0.04 |
| chr11:70609166:70609254:+@chr11:70609408:70609431:+@chr11:70609554:70609717:+ | Mink1 | -0.15 | 0.03 | -0.07 | 0.02 |
| chr4:11287475:11287633:-@chr4:11285078:11285173:-@chr4:11281004:11281124:- | Dpy19l4 | -0.13 | 0.03 | -0.07 | 0.03 |
| chr11:28434081:28434157:-@chr11:28396046:28396165:-@chr11:28385692:28388948:- | Ccdc85a | 0.15 | 0.03 | 0.09 | 0.04 |
| chr4:9635901:9635969:-@chr4:9624360:9624401:-@chr4:9610843:9610938:- | Asph | -0.12 | 0.03 | -0.06 | 0.04 |
| chr8:77155202:77155318:+@chr8:77187520:77187664:+@chr8:77210644:77210774:+ | Nr3c2 | -0.13 | 0.03 | -0.07 | 0.03 |
| chr13:107022012:107022114:-@chr13:106996747:106997129:-@chr13:106993848:106993942:- | Kif2a | 0.12 | 0.03 | 0.06 | 0.04 |
| chr7:109960074:109960422:-@chr7:109935482:109935553:-@chr7:109934693:109934802:- | Dennd5a | 0.14 | 0.03 | 0.08 | 0.04 |
| chr10:81314992:81315118:+@chr10:81317326:81317403:+@chr10:81317766:81319974:+ | Pip5k1c | -0.14 | 0.03 | -0.08 | 0.04 |
| chrX:74337911:74338054:+@chrX:74338134:74338368:+@chrX:74338459:74338601:+ | Plxna3 | 0.12 | 0.03 | 0.08 | 0.02 |
| chrX:95166424:95166486:-@chrX:95165593:95165970:-@chrX:95130836:95131015:- | Arhgef9 | -0.11 | 0.03 | -0.07 | 0.01 |
| chrX:152178964:152179090:+@chrX:152180997:152181092:+@chrX:152202908:152203169:+ | Iqsec2 | 0.11 | 0.03 | 0.09 | 0.03 |
| chr16:32898878:32898939:+@chr16:32900633:32900707:+@chr16:32902419:32902545:+ | Fyttd1 | -0.10 | 0.03 | -0.09 | 0.03 |
| chr11:75349669:75349814:+@chr11:75382250:75382394:+@chr11:75387411:75387500:+ | Smyd4 | -0.08 | 0.03 | -0.10 | 0.03 |
| chr4:129600983:129601134:+@chr4:129601407:129601533:+@chr4:129602195:129602261:+ | Tmem234 | 0.09 | 0.03 | 0.12 | 0.03 |
| chr2:31950529:31950590:+@chr2:31962215:31962281:+@chr2:31969630:31969792:+ | Aif1l | -0.07 | 0.03 | -0.13 | 0.04 |
| chr5:81771584:81771680:+@chr5:81792361:81792412:+@chr5:81794264:81795347:+ | Adgrl3 | 0.10 | 0.03 | 0.17 | 0.01 |