TABLE 1.
Genome statistics of the maize rhizosphere and bulk soil metagenomes
| Genome characteristic | Data for sample code: |
|||
|---|---|---|---|---|
| F4R1 | F4R2 | F4B1 | F4B2 | |
| SRA accession no. | SRR12285195 | SRR12285194 | SRR12285196 | SRR12285197 |
| Raw read counts | ||||
| No. of reads (paired-end) | 26,868,696 | 20,420,846 | 25,092,166 | 20,222,698 |
| Total no. of bases | 3,467,131,872 | 2,641,232,068 | 3,121,851,578 | 2,660,693,984 |
| GC content (%) | 64.53 | 64.23 | 65.04 | 64.93 |
| Counts post-QC (no. of reads retained) | 12,906,831 | 9,730,631 | 11,942,839 | 19,336,030 |
| F4R | F4B | |||
| Counts after combined assembly formation | ||||
| No. of contigs | 1,570 | 241 | ||
| Avg length (bp) | 2,471.75 | 2,388.99 | ||
| Coverage estimate | 7.54 ± 9.85 | 7.47 ± 12.06 | ||
| N50 (bp) | 2,390 | 2,280 | ||