Table 2.
Tandem repeats in nucleotide sequences of the gp60 gene of Cryptosporidium felis.
Sample ID a | GenBank Accession no. | Subtype | 33-bp Repeat (No.) at 460–577 bp | 39-bp Repeat (No.) at 778–911 bp | GGT Repeat (No.) at 1143–1154 |
---|---|---|---|---|---|
SCAU392 | MH240852 | XIXa-39 | R1 b (2) | R2 c (3) | 4 |
SCAU754 | MH240853 | XIXa-40 | R1 (3) | R2 (3) | 4 |
SCAU252 | MW351820 | XIXa-81 | R1 (2) | R2 (4) | 4 |
ECUST19937 | MW351820 | XIXa-81 | R1 (2) | R2 (4) | 4 |
ECUST26248 | MW351820 | XIXa-81 | R1 (2) | R2 (4) | 4 |
ECUST26246 | MW351821 | XIXa-82 | - | R2 (2) | 4 |
ECUST26251 | MW351822 | XIXa-83 | - | R2 (3) | 4 |
SCAU143 | MW351823 | XIXa-84 | R1 (5) | R2 (3) | 4 |
ECUST26250 | MW351824 | XIXa-85 | - | R2 (3) | 4 |
SCAU1309 | MW351825 | XIXa-86 | - | R2 (3) | 4 |
SCAU1850 | MW351826 | XIXa-87 | R1 (2) | R2 (2) | 4 |
SCAU1851 | MW351826 | XIXa-87 | R1 (2) | R2 (2) | 4 |
SCAU343 | MW351827 | XIXa-88 | R1 (2) | R2 (2) | 4 |
SCAU1857 | MW351827 | XIXa-88 | R1 (2) | R2 (2) | 4 |
SCAU405 | MW351828 | XIXa-89 | R1 (2) | R2 (3) | 4 |
SCAU1149 | MW351828 | XIXa-89 | R1 (2) | R2 (3) | 4 |
SCAU320 | MW351829 | XIXa-90 | R1 (2) | R2 (4) | 4 |
ECUST20286 | MW351830 | XIXa-91 | R1 (2) | R2 (3) | 4 |
ECUST26244 | MW351831 | XIXa-92 | R1 (2) | R2 (3) | 4 |
ECUST26249 | MW351832 | XIXa-93 | R1 (2) | R2 (3) | 4 |
a Sample IDs labelled with ECUST were from cats in Shanghai, while those with SCAU were from cats in Guangdong; b 33-bp tandem repeat (5′-CCACCTAGTGGCGGTAGTGGCGTGTCCCCTGCT-3′) with a partial copy at the end; c 39-bp tandem repeat (5′-AGCACAACTGCGGCTACAGCGAGCACTGCGAGTTCGACA-3′) with a partial copy at the end and 0–2 nucleotide differences.