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. 2021 Jan 20;10(2):89. doi: 10.3390/pathogens10020089

Table 2.

Tandem repeats in nucleotide sequences of the gp60 gene of Cryptosporidium felis.

Sample ID a GenBank Accession no. Subtype 33-bp Repeat (No.) at 460–577 bp 39-bp Repeat (No.) at 778–911 bp GGT Repeat (No.)
at 1143–1154
SCAU392 MH240852 XIXa-39 R1 b (2) R2 c (3) 4
SCAU754 MH240853 XIXa-40 R1 (3) R2 (3) 4
SCAU252 MW351820 XIXa-81 R1 (2) R2 (4) 4
ECUST19937 MW351820 XIXa-81 R1 (2) R2 (4) 4
ECUST26248 MW351820 XIXa-81 R1 (2) R2 (4) 4
ECUST26246 MW351821 XIXa-82 - R2 (2) 4
ECUST26251 MW351822 XIXa-83 - R2 (3) 4
SCAU143 MW351823 XIXa-84 R1 (5) R2 (3) 4
ECUST26250 MW351824 XIXa-85 - R2 (3) 4
SCAU1309 MW351825 XIXa-86 - R2 (3) 4
SCAU1850 MW351826 XIXa-87 R1 (2) R2 (2) 4
SCAU1851 MW351826 XIXa-87 R1 (2) R2 (2) 4
SCAU343 MW351827 XIXa-88 R1 (2) R2 (2) 4
SCAU1857 MW351827 XIXa-88 R1 (2) R2 (2) 4
SCAU405 MW351828 XIXa-89 R1 (2) R2 (3) 4
SCAU1149 MW351828 XIXa-89 R1 (2) R2 (3) 4
SCAU320 MW351829 XIXa-90 R1 (2) R2 (4) 4
ECUST20286 MW351830 XIXa-91 R1 (2) R2 (3) 4
ECUST26244 MW351831 XIXa-92 R1 (2) R2 (3) 4
ECUST26249 MW351832 XIXa-93 R1 (2) R2 (3) 4

a Sample IDs labelled with ECUST were from cats in Shanghai, while those with SCAU were from cats in Guangdong; b 33-bp tandem repeat (5′-CCACCTAGTGGCGGTAGTGGCGTGTCCCCTGCT-3′) with a partial copy at the end; c 39-bp tandem repeat (5′-AGCACAACTGCGGCTACAGCGAGCACTGCGAGTTCGACA-3′) with a partial copy at the end and 0–2 nucleotide differences.