Table 4. SNPs determined in the coding regions by DiscoSNP and Bionumerics software.
| LOCALISATION | GENE | GENE PRODUCT | MUTATIONS | MUTATION EFFECT | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| A1 | A2 | B1 | B1R5 | B2 | C | CR10 | |||||
| Chromosome 1 | 577094 | BPLS0525 | putative protein | A | A | A | A | A | 1520 A>G | 1520 A>G | Leu507Pro |
| 772505 | 772505 | - | T | T | T | T | T | T>C | T>C | - | |
| 1047324 | 1047324 | - | C | C | C | C | C | C>A | C>A | - | |
| 1592084 | BPSL1363 | phosphate transport system like protein | C | C | 285 C>T | 285 C>T | C | C | C | Leu95Leu | |
| 1811140 | BPSL1560 | hypothetical protein | G | G | 179 G>T | 179 G>T | G | G | G | Ala60Glu | |
| 1967418 | BPSL1687 | putative protein | G | G | G | G | G | 493 G>C | 493 G>C | Gly165Arg | |
| 2055472 | BPSL1743 | ArcA | A | A | A | A | A | 146 A>C | 146 A>C | Asn49Thr | |
| 2095298 | BPSL1775 | Iron uptake receptor | C | C | C | C | C | 2216 C>T | 2216 C>T | Met739Ile | |
| 2096152 | BPSL1775 | C | C | C | C | C | 1363 G>A | 1363 G>A | Gly455Arg | ||
| 2097391 | BPSL1775 | G | G | G | G | G | 124 C>T | 124 C>T | His42Tyr | ||
| 2097460 | BPSL1775 | C | C | C | C | C | 55 C>T | 55 C>T | |||
| 2199533 | BPSL1846 | putative protein | G | G | G | G | G | 139 G>A | 139 G>A | Arg47Cys | |
| 2313254 | 2313254 | - | G | G | G | G | G | G | G>C | ||
| 2811582 | BPSL2325 | N-acetylclutamate synthase | G | G | G | G | 1094 G>A | G | G | Cys365Tyr | |
| 2912606 | BPSL2409 | ABC Transporter ATP-Binding protein | T | T | 854 T>C | 854 T>C | T | T | T | Leu285Pro | |
| 3337083 | BPSL2789 | WcbR | G | G | G | G | G | 35G>A | 35G>A | Ser12Phe | |
| 3827935 | BPSL3226 | NusG | T | T | T | T | T | 50 T>C | 50 T>C | His17Arg | |
| Chromosome 2 | 1210864 | BPSS0916 | N-hydroxyarylamine O-acetyltransferase | G | G | G | G | G | 764G>C | 764G>C | Gly255Ala |
| 2354508 | BPSS1715 | GltA | C | C | C | C | C | 1219C>T | 1219C>T | Asp407Asn | |
| 2698543 | 2698543 | - | G>A | G>A | G>A | G>A | G>A | G | G | - | |
| INSERTION & DELETION | |||||||||||
| LOCALISATION | GENE | GENE PRODUCT | A1 | A2 | B1 | B1R5 | B2 | C | MUTATION EFFECT | ||
| Chromosome 1 | 2152840 | BPLS1805 | AmrR | 533_534dupCC | 533_534dupCC | frameshift | |||||
| 1967552 | BPSL1687 | Hypothetical protein | 582_596 TGGCTGCGCTGGTGA | 582_596 TGGCTGCGCTGGTGA | 582_596 TGGCTGCGCTGGTGA | 582_596 TGGCTGCGCTGGTGA | 582_596 TGGCTGCGCTGGTGA | Gly195_Pro199del | |||
| 2811321 | BPSL2325 | N-acetylglutamate synthase | 843_844delGC | 843_844delGC | 843_844delGC | 843_844delGC | frameshift | ||||
| Chromosome 2 | BPSS0369 | bacterioferritin ferredoxin protein | 206_delT | 206_delT | frameshift | ||||||