Table 2.
ALV-J isolated in this study and one to one corresponding the most similar reference strain published in Genbank.
| ALV-J isolated in this study | Most similar known strain | Similarity (%) | Time | Location | Source |
|---|---|---|---|---|---|
| JX19DX06-MN262574 | ZB110604-3-KC841154 | 100 | 2011 | Shandong | Chicken |
| JX19AY19-MN262558 | GD13HY-KU500031 | 100 | 2013 | Guangdong | Yellow broiler chicken |
| JX19AY17-MN262556 | JS16JH3-MG700535 | 100 | 2016 | Shandong | Gallus gallus Black-bone |
| JX19AY11-MN262550 | LC110515-3-KC841152 | 100 | 2011 | Shandong | Chicken |
| JX19AY09-MN262548 | JS09GY5-GU982309 | 100 | 2009 | Jiangsu | Commercial layer chicken |
| JX19AY06-MN262545 | GX-J-6-JQ246095 | 100 | 2010 | Guangxi | Chicken |
| JX19AY05-MN262544 | GX-J-7-JQ246096 | 99.78 | 2010 | Guangxi | Chicken |
| JX19XS01-MN262595 | GDQY1201-JX423792 | 99.68 | 2012 | Guangdong | Yellow meat-type chicken |
| JX19AY13-MN262552 | ZB110604-6-KC841157 | 99.67 | 2011 | Shandong | Chicken |
| JX19DX07-MN262575 | SDAU1706-KY980662 | 99.36 | 2017 | Shandong | Hy-line chicken |
| JX19AY21-MN262560 | 2012004-C5-KC453974 | 99.36 | 2012 | Guangxi | Chicken |
| JX19AY08-MN262547 | JS09GY5-GU982309 | 99.35 | 2009 | Jiangsu | Commercial layer chicken |
| JX19AY24-MN262563 | CLB908U-JQ935966 | 99.24 | 2009 | Russia | Gallus gallus |
| JX19AY16-MN262555 | GX-J-8-JQ246097 | 99.04 | 2010 | Guangxi | Chicken |
| JX19DX16-MN262584 | JS16JH10-MG700542 | 98.83 | 2016 | Shandong | Gallus gallus Black-bone |
| JX19AY15-MN262554 | GX-J-8-JQ246097 | 98.61 | 2010 | Guangxi | chicken |
| JX19AY29-MN262568 | GD06SL4-EF103131 | 98.60 | 2006 | Shandong | Chinese 'yellow' chickens |
| JX19DX15-MN262583 | JS16JH10-MG700542 | 98.51 | 2016 | Shandong | Gallus gallus Black-bone |
| JX19DX02-MN262570 | JS16JH2-MG700534 | 98.27 | 2016 | Shandong | Gallus gallus Black-bone |
| JX19AY23-MN262562 | UD5-AF307952 | 98.07 | 2001 | USA | Chicken |
| JX19GF05-MN262592 | sdau1002-JN389518 | 97.86 | 2010 | Shandong | Layer chicken |
| JX19ND02-MN262538 | GX13DF52-KU848768 | 97.83 | 2013 | Guangxi | Chicken |
| JX19AY10-MN262549 | LC110515-3-KC841152 | 97.74 | 2011 | Shandong | Chicken |
| JX19DX19-MN262587 | sdau1002-JN389518 | 97.64 | 2010 | Shandong | Layer chicken |
| JX19DX01-MN262569 | GX14HG01-KU997685 | 97.63 | 2014 | Guangxi | Chicken |
| JX19TH08-MN262535 | GX13DF52-KU848768 | 97.18 | 2013 | Guangxi | Chicken |
| JX19TH03-MN262530 | GX13DF52-KU848768 | 97.18 | 2013 | Guangxi | Chicken |
| JX19DX12-MN262580 | SDAU1706-KY980662 | 97.11 | 2017 | Shandong | Hy-line chicken |
| JX19YG01-MN262598 | GX14LT07- KX034517 | 97.07 | 2014 | Guangxi | Chicken |
| JX19ND03-MN262539 | WA1112-KJ631315 | 96.96 | 2012 | Guangdong | Broiler breeder |
| JX19TH02-MN262529 | WA1112-KJ631315 | 96.85 | 2012 | Guangdong | Broiler breeder |
| JX19TH01-MN262528 | WA1112-KJ631315 | 96.85 | 2012 | Guangdong | Broiler breeder |
| JX19DX13-MN262581 | SDAU1706-KY980662 | 96.79 | 2017 | Shandong | Hy-line chicken |
| JX19DX10-MN262578 | NHH-HM235668 | 96.77 | 2010 | Jiangsu | Layer chicken |
| JX19TH05-MN262532 | WA1112-KJ631315 | 96.74 | 2012 | Guangdong | Broiler breeder |
| JX19TH04-MN262531 | WA1112-KJ631315 | 96.53 | 2012 | Guangdong | Broiler breeder |
| JX19AY14-MN262553 | GD14J2-KU500032 | 96.45 | 2014 | Guangdong | Yellow broiler chicken |
| JX19AY03-MN262542 | PDRC-59831-KP284572 | 96.23 | 2007 | USA | Gallus gallus |
| JX19DX05-MN262573 | GX14YYD2-KU937324 | 96.16 | 2014 | Guangxi | Chicken |
| JX19GF06-MN262593 | M180-KX611834 | 96.13 | 2016 | Guangdong | Chinese yellow chicken |
| JX19DX11-MN262579 | NHH-HM235668 | 96.12 | 2010 | Jiangsu | Layer chicken |
| JX19GF07-MN262594 | M180-KX611834 | 95.91 | 2016 | Guangdong | Chinese yellow chicken |
| JX19AY02-MN262541 | GD0510A-EF103132 | 95.89 | 2016 | Gongdong | Chinese 'yellow' chickens |
| JX19AY27-MN262566 | XX2-09-HM775331 | 95.75 | 2010 | Guangdong | Chicken |
| JX19AY26-MN262565 | WN100401-HQ271447 | 95.39 | 2010 | Anhui | Chicken |
| JX19AY22-MN262561 | GX13ZS02-KY983561 | 95.22 | 2013 | Guangxi | Gallus gallus |
| JX19ND01-MN262537 | WA1112-KJ631315 | 95.11 | 2012 | Guangdong | Broiler breeder |
| JX19AY18-MN262557 | XX2-09-HM775331 | 94.91 | 2010 | Guangdong | Chicken |
| JX19AY04-MN262543 | GX13ZS12-KY983563 | 94.90 | 2013 | Guangxi | Gallus gallus |
| JX19AY12-MN262551 | ZB110604-6-KC841157 | 94.88 | 2011 | Shandong | Chicken |
| JX19AY01-MN262540 | GDQY1201-JX423792 | 94.85 | 2012 | Guangdong | Yellow meat-type chicken |
| JX19AY20-MN262559 | WN100401-HQ271447 | 94.50 | 2010 | Anhui | Chicken |
| JX19AY28-MN262567 | WSC112-KJ631322 | 94.45 | 2012 | Guangdong | Broiler breeder |
| JX19TH07-MN262534 | AF88-AF247390 | 94.30 | 2016 | USA | Chicken |
| JX19TH09-MN262536 | AF88-AF247390 | 94.04 | 2016 | USA | Chicken |
| JX19AY07-MN262546 | GX14HG04-KX058878 | 93.90 | 2014 | Guangxi | Chicken |
| JX19TH06-MN262533 | AF88-AF247390 | 93.40 | 2016 | USA | Chicken |
| JX19DX17-MN262585 | HuB09-1-HM600813 | 93.35 | 2009 | Beijing | Chicken |
| JX19DX08-MN262576 | GX14HG04-KX058878 | 93.27 | 2014 | Guangxi | Chicken |
| JX19GF02-MN262589 | GX14YL03- KT598470 | 92.95 | 2014 | Guangxi | Chicken |
| JX19GF03-MN262590 | GX15MM6-1-KU923584 | 92.84 | 2015 | Guangxi | Gallus gallus |
| JX19DX14-MN262582 | GX15MM6-1-KU923584 | 92.65 | 2015 | Guangxi | Gallus gallus |
| JX19DX03-MN262571 | SDAU1706-KY980662 | 92.60 | 2017 | Shandong | Hy-line chicken |
| JX19DX04-MN262572 | GX14YL03- KT598470 | 92.59 | 2014 | Guangxi | Chicken |
| JX19DX18-MN262586 | GX15MM6-1-KU923584 | 92.52 | 2015 | Guangxi | Gallus gallus |
| JX19CR01-MN262597 | SD110503-KF562374 | 92.37 | 2011 | Shandong | Gallus gallus |
| JX19GF04-MN262591 | GX15MM6-1-KU923584 | 91.97 | 2015 | Guangxi | Gallus gallus |
| JX19GF01-MN262588 | GX15MM6-1-KU923584 | 91.97 | 2015 | Guangxi | Gallus gallus |
| JX19DX09-MN262577 | SDAU1706-KY980662 | 91.96 | 2017 | Shandong | Hy-line chicken |
| JX19AY25-MN262564 | GDQY1201-JX423792 | 91.94 | 2012 | Guangdong | Yellow meat-type chicken |
| JX19XS02-MN262596 | GX14YL03- KT598470 | 91.72 | 2014 | Guangxi | Chicken |
The geographic location of the isolates in China is accurate to the provinces. The names of 13 strains that might replicate more slowly were bold.