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. Author manuscript; available in PMC: 2021 Feb 27.
Published in final edited form as: Chin Clin Oncol. 2019 Jul 29;8(4):42. doi: 10.21037/cco.2019.07.06

Table 1.

Main studies reporting molecular alterations associated with biliary tract cancers

First author Platform/genes analyzed N of patients Genomic alterations (%)
Nakamura et al. (13) WES 260 ICC: KRAS 25%, FGFR2 8%, IDH1 6%;
EHC: TP53 26%, KRAS 12%, SMAD4 10%;
GBC: TP53 43%, ARID2 18%, EGFR 18%
Javle et al. (14) HC NGS 182 ICC 412; EHC 57; GBC 85 ICC: TP53 27%, KRAS 22%, IDH1 16%;
EHC: KRAS 42%, TP53 40%, SMAD4 21 %;
GBC: TP53 59%, CDKN2A/B 19%, ERBB2 16%
Lowery et al. (15) HC NGS 341/410 ICC 158; EHC 37 ICC: IDH1 30%, BAP1 20%, FGFR2 14%;
EHC: KRAS 38%, TP53 49%, SMAD4 30%
Narayan et al. (16) HC NGS 341/410 GBC 81 TP53 58%, SMAD4 31%, ARID1A 25%
Churi et al. (17) AB NGS 46 ICC 55; EHC 20 ICC: TP53 29%, KRAS 24%, IDH 24%;
EHC: KRAS 40%, TP53 45%, SMAD4 25%
Li et al. (18) WES GBC 57 TP53 47%, ERBB3 12%, KRAS 8%
Ross et al. (19) HC NGS 182 ICC 28 ARID1A 36%, IDH1/2 36%, TP53 36%
Zou et al. (20) WES ICC 102 TP53 38%, KRAS 17%, ARID1A 7%

WES, whole-exome sequencing; HC NGS, hybrid capture next generation sequencing; AB NGS, amplicon-based next generation sequencing; ICC, intrahepatic cholangiocarcinoma; EHC, extrahepatic cholangiocarcinoma; GBC, gallbladder cancer.