Table 1.
Samples | Ctrl1 | Ctrl2 | Ctrl3 | Starve1 | Starve2 | Starve3 |
---|---|---|---|---|---|---|
Raw reads (M) | 50.82 | 45.52 | 54.45 | 44.12 | 46.26 | 44.79 |
Clean reads (M) | 50.44 | 45.20 | 52.01 | 43.61 | 45.83 | 44.29 |
Good reads (%) | 99.25 | 99.30 | 95.51 | 98.84 | 99.07 | 98.88 |
Error rate (%) | 0.0250 | 0.0250 | 0.0251 | 0.0253 | 0.0251 | 0.0250 |
Q20 (%) | 98.02 | 97.99 | 97.96 | 97.89 | 97.96 | 98.02 |
Q30 (%) | 94.21 | 94.12 | 94.08 | 93.92 | 94.05 | 94.18 |
Total mapped (M) | 46.18 | 41.18 | 47.85 | 39.87 | 41.96 | 40.68 |
Total mapped (%) | 91.55 | 91.11 | 92.0 | 91.41 | 91.55 | 91.86 |
Uniquely mapped | 39.27 | 34.77 | 40.42 | 33.15 | 35.03 | 34.30 |
Uniquely mapped (%) | 77.85 | 76.92 | 77.71 | 76.02 | 76.42 | 77.44 |