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. 2021 Feb 5;7(2):117. doi: 10.3390/jof7020117

Figure 10.

Figure 10

Phylogram generated from maximum likelihood analysis based on combined LSU, SSU, ITS, TEF1-α, TUB2, and ACT sequence data representing the species of Phyllachorales and related taxa. Sequences are taken from Huang et al. [82]. One hundred-two taxa were included in the combined analyses, which comprised 2395 characters (LSU: 892, ITS: 527, TEF1-α = 202; TUB2: 513; ACT: 261) after alignment. The best scoring RAxML tree with a final likelihood value of −22707.720097 is presented. The matrix had 1011 distinct alignment patterns, with 45.51% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.228986, C = 0.288393, G = 0.253607, T = 0.229013; substitution rates: AC = 1.333048, AG = 3.557820, AT = 1.416942, CG = 1.385484, CT = 4.971984, GT = 1.000000; gamma distribution shape parameter α = 0.255190. Bootstrap support values for ML equal to or greater than 75% and BYPP equal to or greater than 0.95 are given above the nodes. Pleurostoma ootheca (CBS 115329) and Pleurostoma richardsiae (CBS 270.33) were used as the outgroup taxa. The newly generated sequence is indicated in blue. The ex-type strains are indicated in bold.