Table 2.
Examples of common stapling chemistries to impose helical peptide conformation.
Chemistry | Residues Involved | Compatible Arrangement | Does Stereochemistry of the Staple Handles Need to be Considered? | Comment |
---|---|---|---|---|
alkene ring-closing metathesis | (homo)serine O-allyl ethers [59] | [i, i + 4] | no | all hydrocarbon staple |
α,α-disubstituted residues with olefinic side chains (R or S configuration, 5 or 8 atoms long) [60] | [i, i + 4] and [i, i + 7] | yes (S5/S5 for [i, i + 4], S8/R5 or S5/R8 for [i, i + 7]) | ||
lactamisation | lysine and glutamate, or ornithine and aspartate [61] | only compatible with [i, i + 4] arrangement | no | requires extra orthogonal protective groups for amino and carboxy groups for on resin lactamisation |
cycloadditions | azide and alkyne group containing residues with 4 + 2 or 4 + 3 methylene units long side chains [62] | [i, i + 4] | no | well-established click reaction (Cu(I)-catalyzed azide-alkyne cycloaddition) |
tetrazole and alkene group containing residues [63] | UV-induced cycloaddition between tetrazoles and alkenes to yield fluorescent pyrazoline tethers | |||
disulfide bridges | thiol group containing residues [64] | [i, i + 7] | yes (combination of D and L-residues) | chronologically the oldest technique, requires acetamidomethyl protecting groups for thiols, staple unstable (prone to reduction) |
thioether bridges | cysteine and an alpha-bromo amide group containing residue [65] | [i, i + 3] and [i, i + 4] | no | staple stable, higher helicity achieved with [i, i + 3] arrangement |
two (homo)cysteines + dichloroacetone crosslinker [66] | [i, i + 4] | no | bis-alkylating crosslinker amenable to further derivation via oxime ligation (e.g., fluorophore or biotin coupling) | |
cysteines + perfluoroaromatic crosslinker (e.g., hexafluorobenzene) [48] | [i, i + 4] | no | regioselective reaction (para-disubstituted staple) proceeding under mild conditions in high yield even for unprotected peptides |