1. Estimating the test characteristics of the applied in-house real-time PCRs:
Specificity testing of the group-specific helminth real-time PCRs with helminth DNA
Sensitivity and specificity testing of the group specific helminth real-time PCRs with DNA from stool samples positive in genus- and species-specific helminth real-time PCR after DNA extraction applying the QiaAMP DNA Stool Mini Kit
Sensitivity and specificity testing of the in-house helminth real-time PCRs with DNA from stool samples positive for helminth eggs or larvae in microscopy after DNA extraction applying the QiaAMP DNA Stool Mini Kit
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2. Comparing the effects of nucleic acid extraction applying the QiaAMP DNA Stool Mini Kit and a harsher bead beating-based nucleic extraction scheme with:
Historic residual stool samples which had been positive before in any helminth real-time PCR after nucleic acid extraction using the QiaAMP DNA Stool Mini Kit
Stool samples from a Dutch external quality assessment scheme for helminths
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3. Comparative assessment of the effects of nucleic acid extraction applying the QiaAMP DNA Stool Mini Kit and a harsher bead beating-based nucleic extraction scheme on nonhelminth pathogens which might also be relevant in the medical routine diagnostic laboratory with:
Historic residual stool samples which had been positive before in any bacteria real-time PCR after nucleic acid extraction using the QiaAMP DNA Stool Mini Kit
Historic residual stool samples which had been positive before in any protozoa real-time PCR after nucleic acid extraction using the QiaAMP DNA Stool Mini Kit
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