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. Author manuscript; available in PMC: 2022 Oct 1.
Published in final edited form as: J Biomol Struct Dyn. 2020 Jul 28;39(16):6084–6098. doi: 10.1080/07391102.2020.1797539

Figure 5: Docking of epitopes to HLA structures.

Figure 5:

The epitopes (red) were docked to six HLA 3D structures available in PDB using Boston University’s ClusPro server. The six complex structures found in PDB include four MHC Class I molecules (A-D, see Table 1) and two MHC Class II molecules (E-F, see Table 2). The epitopes were modeled by PEP-Fold 3.0 that uses ab initio modeling.