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. 2021 Feb 11;7(2):131. doi: 10.3390/jof7020131

Table 1.

Isolation and accession numbers of sequences used in the phylogenetic analyses. Type specimens are labeled with HT (holotype) ET (epitype) and PT (paratype). Isolates/sequences in bold were isolated/sequenced in present study. N/A: not available.

Species Strain Number Origin Status GenBank Accession Number References
ITS LSU RPB2 TUB2
Annulohypoxylon annulatum CBS 140775 Texas ET KY610418 KY610418 KY624263 KX376353 [2,23]
Annulohypoxylon michelianum CBS 119993 Spain KX376320 KY610423 KY624234 KX271239 [2,29]
Annulohypoxylon moriforme CBS 123579 Martinique KX376321 KY610425 KY624289 KX271261 [2,23]
Annulohypoxylon nitens MFLUCC 12–0823 Thailand KJ934991 KJ934992 KJ934994 KJ934993 [30]
Annulohypoxylon stygium MUCL 54601 French Guiana KY610409 KY610475 KY624292 KX271263 [2]
Annulohypoxylon truncatum CBS 140778 Texas ET KY610419 KY610419 KY624277 KX376352 [2,23]
Biscogniauxia nummularia MUCL 51395 France ET KY610382 KY610427 KY624236 KX271241 [2]
Daldinia andina CBS 114736 Ecuador HT AM749918 KY610430 KY624239 KC977259 [2,29,31]
Daldinia bambusicola CBS 122872 Thailand HT KY610385 KY610431 KY624241 AY951688 [2,6]
Daldinia caldariorum MUCL 49211 France AM749934 KY610433 KY624242 KC977282 [2,29,31]
Daldinia childiae CBS 122881 France HT KU683757 MH874773 KU684290 KU684129 [32,33]
Daldinia concentrica CBS 113277 Germany AY616683 KY610434 KY624243 KC977274 [2,17,29]
Daldinia dennisii CBS 114741 Australia HT JX658477 KY610435 KY624244 KC977262 [2,29,34]
Daldinia eschscholtzii MUCL 45435 Benin JX658484 KY610437 KY624246 KC977266 [2,29,34]
Daldinia loculatoides CBS 113279 UK ET AF176982 KY610438 KY624247 KX271246 [2]
Daldinia macaronesica CBS 113040 Spain PT KY610398 KY610477 KY624294 KX271266 [2]
Daldinia petriniae MUCL 49214 Austria ET AM749937 KY610439 KY624248 KC977261 [2,29,31]
Daldinia placentiformis MUCL 47603 Mexico AM749921 KY610440 KY624249 KC977278 [2,29,31]
Daldinia pyrenaica MUCL 53969 France KY610413 KY610413 KY624274 KY624312 [2]
Daldinia steglichii MUCL 43512 Papua New Guinea PT KY610399 KY610479 KY624250 KX271269 [2]
Daldinia theissenii CBS 113044 Argentina PT KY610388 KY610441 KY624251 KX271247 [2]
Daldinia vernicosa CBS 119316 Germany ET KY610395 KY610442 KY624252 KC977260 [2,29]
Entonaema liquescens ATCC 46302 USA KY610389 KY610443 KY624253 KX271248 [2]
Graphostroma platystomum CBS 270.87 France JX658535 DQ836906 KY624296 HG934108 [2,34,35,36]
Hypomontagnella barbarensis STMA 14081 Argentina HT MK131720 MK131718 MK135891 MK135893 [7]
Hypomontagnella monticulosa MUCL 54604 French Guiana ET KY610404 KY610487 KY624305 KX271273 [2]
Hypomontagnella submonticulosa CBS 115280 France KC968923 KY610457 KY624226 KC977267 [2,29]
Hypoxylon carneum MUCL 54177 France KY610400 KY610480 KY624297 KX271270 [2]
Hypoxylon cercidicola CBS 119009 France KC968908 KY610444 KY624254 KC977263 [2,29]
Hypoxylon crocopeplum CBS 119004 France KC968907 KY610445 KY624255 KC977268 [2,29]
Hypoxylon eurasiaticum MUCL 57720 Iran HT MW367851 not obtained MW373852 MW373861 This study
Hypoxylon eurasiaticum MUCL 57721 Iran MW367852 not obtained MW373853 MW373862 This study
Hypoxylon eurasiaticum MUCL 57722 Iran MW367853 not obtained MW373854 MW373863 This study
Hypoxylon eurasiaticum MUCL 57723 Iran MW367854 not obtained MW373855 MW373864 This study
Hypoxylon eurasiaticum DSM 112037 Poland MW367855 not obtained MW373856 MW373865 This study
Hypoxylon fendleri MUCL 54792 French Guiana KF234421 KY610481 KY624298 KF300547 [2,29]
Hypoxylon fragiforme MUCL 51264 Germany ET KC477229 KM186295 KM186296 KX271282 [2,30,37]
Hypoxylon fuscum sensu stricto CBS 113049 France ET KY610401 KY610482 KY624299 KX271271 [2]
Hypoxylon fuscum s. str. DSM 112039 Austria MW367856 MW367847 MW373857 MW373866 This study
Hypoxylon griseobrunneum CBS 331.73 India HT KY610402 KY610483 KY624300 KC977303 [2,29]
Hypoxylon guilanense MUCL 57726 Iran HT MT214997 MT214992 MT212235 MT212239 [21]
Hypoxylon haematostroma MUCL 53301 Martinique ET KC968911 KY610484 KY624301 KC977291 [2,29]
Hypoxylon howeanum MUCL 47599 Germany AM749928 KY610448 KY624258 KC977277 [2,29,31]
Hypoxylon hypomiltum MUCL 51845 Guadeloupe KY610403 KY610449 KY624302 KX271249 [2]
Hypoxylon invadens MUCL 51475 France HT MT809133 MT809132 MT813037 MT813038 [38]
Hypoxylon investiens CBS 118183 Malaysia KC968925 KY610450 KY624259 KC977270 [2,29]
Hypoxylon lateripigmentum MUCL 53304 Martinique HT KC968933 KY610486 KY624304 KC977290 [2,29]
Hypoxylon lenormandii CBS 119003 Ecuador KC968943 KY610452 KY624261 KC977273 [2,29]
Hypoxylon ochraceum MUCL 54625 Martinique ET KC968937 N/A KY624271 KC977300 [2,29]
Hypoxylon lienhwacheense MFLUCC 14-1231 Thailand KU604558 MK287550 MK287563 KU159522 [39,40]
Hypoxylon musceum MUCL 53765 Guadeloupe KC968926 KY610488 KY624306 KC977280 [2,29]
Hypoxylon olivaceopigmentum DSM 107924 USA HT MK287530 MK287542 MK287555 MK287568 [39]
Hypoxylon papillatum ATCC 58729 USA HT KC968919 KY610454 KY624223 KC977258 [2,29]
Hypoxylon perforatum CBS 115281 France KY610391 KY610455 KY624224 KX271250 [2]
Hypoxylon petriniae CBS 114746 France HT KY610405 KY610491 KY624279 KX271274 [2,23]
Hypoxylon pilgerianum STMA 13455 Martinique KY610412 KY610412 KY624308 KY624315 [2]
Hypoxylon porphyreum CBS 119022 France KC968921 KY610456 KY624225 KC977264 [2,29]
Hypoxylon pseudofuscum DSM 112038 Germany HT MW367857 MW367848 MW373858 MW373867 This study
Hypoxylon pseudofuscum DSM 112035 Germany MW367858 MW367849 MW373859 MW373868 This study
Hypoxylon pseudofuscum DSM 112036 Germany MW367859 MW367850 MW373860 MW373869 This study
Hypoxylon pulicicidum CBS 122622 Martinique HT JX183075 KY610492 KY624280 JX183072 [2,41]
Hypoxylon rickii MUCL 53309 Martinique ET KC968932 KY610416 KY624281 KC977288 [2,29]
Hypoxylon rubiginosum MUCL 52887 Germany ET KC477232 KY610469 KY624266 KY624311 [2,29]
Hypoxylon samuelsii MUCL 51843 Guadeloupe ET KC968916 KY610466 KY624269 KC977286 [2,29]
Hypoxylon texense DSM 107933 USA HT MK287536 MK287548 MK287561 MK287574 [39]
Hypoxylon ticinense CBS 115271 France JQ009317 KY610471 KY624272 AY951757 [2,6]
Hypoxylon trugodes MUCL 54794 Sri Lanka ET KF234422 KY610493 KY624282 KF300548 [2,29]
Hypoxylon vogesiacum CBS 115273 France KC968920 KY610417 KY624283 KX271275 [2,23,29]
Jackrogersella cohaerens CBS 119126 Germany KY610396 KY610497 KY624270 KY624314 [2]
Jackrogersella minutella CBS 119015 Portugal KY610381 KY610424 KY624235 KX271240 [2,23]
Jackrogersella multiformis CBS 119016 Germany ET KC477234 KY610473 KY624290 KX271262 [2,23,29]
Pyrenopolyporus hunteri MUCL 52673 Ivory Coast ET KY610421 KY610472 KY624309 KU159530 [2,23]
Pyrenopolyporus laminosus MUCL 53305 Martinique HT KC968934 KY610485 KY624303 KC977292 [2,29]
Pyrenopolyporus nicaraguensis CBS 117739 Burkina_Faso AM749922 KY610489 KY624307 KC977272 [2,29,31]
Rhopalostroma angolense CBS 126414 Ivory Coast KY610420 KY610459 KY624228 KX271277 [2]
Ruwenzoria pseudoannulata MUCL 51394 D. R. Congo HT KY610406 KY610494 KY624286 KX271278 [2]
Thamnomyces dendroidea CBS 123578 French Guiana HT FN428831 KY610467 KY624232 KY624313 [2,42]
Xylaria arbuscula CBS 126415 Germany KY610394 KY610463 KY624287 KX271257 [2,43]
Xylaria hypoxylon CBS 122620 Sweden ET KY610407 KY610495 KY624231 KX271279 [2,44]