Table 2.
Key lncRNAs identified in this study that are related to heat response in Chinese cabbage
| lncRNA_ID | Potential target genes | Number of potential target genes | Activity modea |
|---|---|---|---|
| LNC_007838 | HSPs and HSP-related genes | 21 | cis or trans |
| LNC_016696 | HSPs and HSP-related genes | 21 | cis or trans |
| LNC_010992 | HSPs and HSP-related genes | 17 | trans |
| LNC_003028 | HSPs and HSP-related genes | 16 | trans |
| LNC_005395 | HSPs and HSP-related genes | 13 | trans |
| LNC_009853 | HSPs and HSP-related genes | 13 | trans |
| LNC_003977 | HSPs and HSP-related genes | 11 | trans |
| LNC_005895 | HSPs and HSP-related genes | 11 | cis or trans |
| LNC_006136 | HSPs and HSP-related genes | 11 | trans |
| LNC_007840 | HSPs and HSP-related genes | 7 | cis or trans |
| LNC_015255 | HSPs | 7 | cis or trans |
| LNC_004890 | PYR/PYLs | 6 | trans |
| LNC_005790 | PYR/PYLs | 6 | trans |
| LNC_005338 | PYR/PYLs | 5 | trans |
| LNC_005590 | PYR/PYLs | 5 | trans |
| LNC_017421 | PYR/PYLs | 5 | trans |
| LNC_001877 | PYR/PYLs | 4 | trans |
| LNC_006162 | PYR/PYLs | 4 | trans |
| LNC_006421 | PYR/PYLs | 4 | trans |
| LNC_011542 | PYR/PYLs | 4 | trans |
| LNC_010992 | clpB1 | 1 | cis |
| LNC_013535 | DHR18 | 1 | cis |
| LNC_000609 | slu7 | 1 | cis |
| LNC_002021 | MLP-like genes | 1 | cis |
| LNC_000283 | MLP-like genes | 1 | cis |
| LNC_014195 | MLP-like genes | 1 | cis |
aFor trans-acting mode, lncRNAs that might regulate more than ten HSP genes and more than three PYR/PYL genes were selected.