Table 1 - . Characteristics of the genome sequences of four different R. solanacearum strains of the Moko ecotype from Brazil.
| Features | CCRMRs277a | CCRMRs287b | CCRMRs304c | CCRMRsB7d | ||||
|---|---|---|---|---|---|---|---|---|
| Coverage | 133 | 148 | 129.8 | 163 | ||||
| Size before alignment (bp) | 5.659.851 | 5.464.210 | 5.654.054 | 5.847.640 | ||||
| GC content (%) | 66.54 | 66.59 | 66.55 | 66.46 | ||||
| Number of contigs | 360 | 92 | 368 | 88 | ||||
| N50 | 43.891 | 150.675 | 45.590 | 216.010 | ||||
| BUSCO (%) | 97.97 | 98.65 | 97.97 | 97.97 | ||||
| Size after alignment (bp) | 5.636.326 | 5.444.697 | 5.645.239 | 5.854.658 | ||||
| Chrome | Plasmidf | Chrom | Plasmid | Chrom | Plasmid | Chrom | Plasmid | |
| References strains | PO82g | UW163h | UW163g | UW163h | PO82g | UW163h | PO82h | UW163h |
| Size after alignment (bp) | 3.549.795 | 2.086.531 | 3.512.030 | 1.932.667 | 3.549.663 | 2.095.576 | 3.716.474 | 2.138.184 |
| Coding sequences | 3.099 | 1.718 | 3.315 | 1.669 | 3.070 | 1.720 | 3.521 | 1.750 |
| Subsytems number | 299 | 81 | 318 | 83 | 291 | 88 | 321 | 93 |
| RNAs | 46 | 1 | 52 | 1 | 45 | 1 | 51 | 4 |
- CCRMRs277 = sequevar IIA-24; b- CCRMRs287 = sequevar IIB-4; c- CCRMRs304 = sequevar IIA-24; d- CCRMRsB7 = sequevar IIB-25.
- Chromosome;
- Megaplasmid;
- NUCmer alignment algorithm;
-PROmer alignment algorithm.