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. 2021 Feb 15;13(2):147. doi: 10.3390/toxins13020147

Table 1.

Examples of cell-penetrating peptide (CPP) archetypes, origins, sequences, secondary structures and physicochemical classes.

CPP Origin Sequence Physicochemical Class and Secondary Structure
Protein-derived
TAT48-60 Protein of HIV-1 GRKKRRQRRRPQ cationic random coil (rdc) *
Penetratin (Antp43-68) Antennapedia homeodomain of D. melanogaster RQIKIWFQNRRMKWKK cationic β-strand/rdc *
VP22 Herpes simplex virus type I NAKTRRHERRRKLAIER amphipathic α-helix
pVEC Cadherin615–632 IRKQAHAHSK amphipathic β-strand/rdc *
Chimeric
Transportan Galanine/Mastoparan GWTLNSAGYLLGKINLKALAALAKKIL amphipathic α-helix *
Pep-1 HIV-reverse transcriptase/SV40 T-antigen KETWWETWWTEWSQPKKKRKV amphipathic α-helix *
MPG HIV-gp41/SV40 T-antigen GALFLGFLGAAGSTMGAWSQPKKKRKV amphipathic β-strand/rdc
Synthetic
Polyarginines Based on Tat peptide Poly-arginine, (R)n; 6 < n < 12 cationic rdc *
MAP designed KLALKLALKALKAALKLA amphipathic α-helix *
KALA designed WEAKLAKALAKALAKHLAKALAKALKACEA amphipathic α-helix

Note: Examples are based on references [17,19,20]. The mechanisms of membrane translocation and cell entry of these archetypal CPPs are not definitively elucidated. However, distinct mechanisms are involved, such as direct translocation (non-endocytic pathway, like an inverted micelle, pore formation, carpet-like and membrane thinning) and endocytosis-mediated internalization (macropinocytosis, clathrin- and caveolin-dependent endocytosis, clathrin- and caveolin-independent endocytosis and receptor-mediated endocytosis. These CPPs can utilize more than a single route for cell entry [19,20,30]. “*”, as structurally characterized in the presence of negatively charged dioleoylphosphatidylglycerol [26].