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. 2021 Mar;31(3):448–460. doi: 10.1101/gr.257246.119

Figure 5.

Figure 5.

Arriba workflow. Arriba is an extension of a standard alignment workflow based on STAR. In legacy mode, STAR writes chimeric alignments to the file Chimeric.out.sam. In newer versions, STAR writes them to the main output file Aligned.out.bam. Arriba can take either file as input to search for gene fusions.