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. 2021 Feb 26;9:e10505. doi: 10.7717/peerj.10505

Table 1 . The candidate miRNAs interactions.

The first column represents the mirBase ID of miRNAs. The three next columns contain information about target UCRs. The fifth column includes the UniProt ID of the most potent rival mRNA. The two next columns represent the free binding energy to target UCR and the most potent rival mRNA, respectively. The last column shows the efficiency score of the candidate miRNA.

miRNA UCR sequence UCR location UCR region rival mRNA ID E(M,U) minR{E(M,R)} S(M,U)
hsa-miR-374a-5p UUACAAACAAUUUGAUACUU 19569–19588 ORF1ab, nsp11 ENSG00000186184 −15.27 −10.9 −4.37
hsa-miR-548b-3p GAAGAGCAACCAAUG 27361–27375 ORF6 ENSG00000109572 −10.05 −6.1 −3.95
hsa-miR-1-3p CACAUGCUUUUCCA 18681–18694 ORF1ab, nsp11 ENSG00000100485 −10.86 −8.4 −2.46
hsa-miR-224-5p UUUACUCAACCGCUACUUUAGAC 11659–11681 ORF1ab, nsp6 ENSG00000113273 −9.47 −7.1 −2.37
hsa-miR-98-5p UUUACUCAACCGCUACUUUAGAC 11659–11681 ORF1ab, nsp6 ENSG00000205250 −11.7 −10.7 −1
hsa-miR-26a-2-3p UCAAGAAAUUCAAC 28853–28866 ORF9, nucleocapsid protein ENSG00000171772 −6.98 −6.3 −0.68
hsa-miR-192-3p UCUUGUCUGUUAAUC 16361–16375 ORF1ab, nsp13-ZBD ENSG00000185658 −6.98 −6.7 −0.28