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DEGs in murine diaphragm cells. Pairwise comparisons were made to compare DEGs in uninfected vs infected mouse samples at each time point (top) and between time points (bottom). Box length indicates the number of upregulated (left) or downregulated (right) DEGs, with the total number of up- and downregulated genes shown. Genes with > fourfold differential expression (blue) or twofold differential expression (yellow). For abbreviations, see Figs. 1 and 3
