Table 2.
Sequencing data statistics
| Samples | Clean readsa | Clean basesb | GC contentc (%) | % ≥ Q30d |
|---|---|---|---|---|
| d-0-1 | 29,306,627 | 8,723,905,770 | 49.41 | 93.33 |
| d-0-2 | 29,701,695 | 8,856,713,318 | 49.12 | 93.23 |
| d-0-3 | 24,573,915 | 7,325,026,546 | 49.13 | 93.51 |
| d-1-1 | 42,774,938 | 12,743,577,440 | 49.50 | 95.06 |
| d-1-2 | 47,356,896 | 14,119,786,038 | 49.09 | 94.64 |
| d-1-3 | 47,632,923 | 14,229,261,830 | 49.12 | 94.83 |
| d-3-1 | 41,692,065 | 12,459,755,692 | 49.22 | 94.96 |
| d-3-2 | 44,962,040 | 13,435,712,256 | 49.19 | 95.19 |
| d-3-3 | 41,808,804 | 12,496,583,212 | 49.03 | 95.04 |
| d-7-1 | 52,403,887 | 15,659,838,448 | 48.70 | 94.91 |
| d-7-2 | 44,892,431 | 13,419,760,674 | 49.43 | 94.82 |
| d-7-3 | 43,566,080 | 13,011,606,674 | 48.79 | 94.77 |
| d-10-1 | 46,072,970 | 13,783,739,164 | 49.41 | 94.85 |
| d-10-2 | 53,341,148 | 15,929,948,426 | 49.46 | 94.83 |
| d-10-3 | 50,069,261 | 14,950,813,380 | 49.36 | 94.67 |
| d-15-1 | 47,120,191 | 14,081,050,788 | 49.71 | 94.60 |
| d-15-2 | 41,755,099 | 12,464,431,734 | 48.94 | 94.73 |
| d-15-3 | 42,645,130 | 12,738,561,562 | 49.23 | 94.92 |
aPaired-end reads of clean data
bTotal number of bases of clean data
cGC content percentage of clean data, i.e. percentage of clean data for bases G and C
dPercentage of bases with a Q-score of ≥ 30