TABLE 3.
Sample name | Reads | BINs | Sequences | OTU Counts | % Filtered | % Dereplicated |
---|---|---|---|---|---|---|
GT‐1‐03‐07‐2018‐COI | 148,806 | 181 | 125,219 | 218 | 2.45 | 69.19 |
GT‐2‐03‐07‐2018_COI | 152,732 | 217 | 124,416 | 163 | 2.43 | 70.22 |
GT‐3‐03‐07‐2018_COI | 135,306 | 187 | 89,030 | 165 | 1.18 | 69.2 |
GT‐4‐03‐07‐2018_COI | 137,956 | 177 | 115,974 | 117 | 0.7 | 67.74 |
GT‐5‐03‐07‐2018_COI | 135,926 | 203 | 99,710 | 145 | 1.77 | 66.23 |
GT‐6‐03‐07‐2018_COI | 148,600 | 195 | 112,480 | 163 | 4.05 | 68.96 |
WP‐1‐18‐7‐18_COI | 160,544 | 83 | 5,132 | 36 | 60.43 | 78.78 |
WP‐2‐18‐7‐18_COI | 170,393 | 159 | 115,071 | 117 | 1.71 | 70.7 |
WP‐3‐18‐7‐18_COI | 171,886 | 205 | 109,977 | 188 | 4 | 67.16 |
WP‐4‐18‐7‐18_COI | 144,228 | 190 | 90,246 | 105 | 2.3 | 66.64 |
WP‐5‐18‐7‐18_COI | 141,555 | 104 | 85,013 | 37 | 11.43 | 79.07 |
WP‐6‐18‐7‐18_COI | 156,955 | 172 | 96,160 | 60 | 8.5 | 69.37 |
BA‐1_19‐7‐18_COI | 188,612 | 123 | 129,004 | 233 | 8.24 | 70.17 |
BA‐2_19‐7‐18_COI | 200,026 | 125 | 142,661 | 300 | 13.69 | 69.76 |
BA‐3_19‐7‐18_COI | 189,626 | 191 | 112,161 | 259 | 18.34 | 67.4 |
BA‐4_19‐7‐18_COI | 200,985 | 166 | 134,391 | 194 | 13.02 | 72.98 |
BA‐5_19‐7‐18_COI | 308,781 | 116 | 237,742 | 160 | 9.48 | 78.77 |
BA‐6_19‐7‐18_COI | 338,642 | 189 | 190,311 | 410 | 25.73 | 70.82 |
TO‐1‐30‐07‐2018_COI | 149,318 | 217 | 106,971 | 254 | 3.84 | 67.71 |
TO‐2‐30‐07‐2018_COI | 133,566 | 195 | 76,130 | 358 | 8.76 | 66.99 |
TO‐3‐30‐07‐2018_COI | 139,968 | 128 | 83,041 | 320 | 5.04 | 70.31 |
TO‐4‐30‐07‐2018_COI | 153,723 | 135 | 102,129 | 243 | 3.82 | 69.19 |
TO‐5‐30‐07‐2018_COI | 138,016 | 284 | 112,626 | 224 | 3.4 | 67.78 |
TO‐6‐30‐07‐2018_COI | 154,558 | 313 | 107,918 | 316 | 10.94 | 66.3 |
Number of reads, BINs, sequences (Seqs) associated with BIN identification, remaining OTU counts, percentage of filtered reads (Filtered %), and percentage of dereplicated reads (Dereplicated %) per sample for COI | ||||||
---|---|---|---|---|---|---|
Sample name | Reads | BINs | Seqs | OTU Counts | Filtered % | Dereplicated % |
GT‐1_16‐8‐2018_COI | 172,717 | 194 | 140,527 | 158 | 6.11 | 68.83 |
GT‐2_16‐8‐2018_COI | 212,186 | 213 | 165,688 | 203 | 5.27 | 68.54 |
GT‐3_16‐8‐2018_COI | 254,985 | 188 | 204,726 | 194 | 3.58 | 69.25 |
GT‐4_16‐8‐2018_COI | 253,413 | 217 | 212,061 | 135 | 2.7 | 69.08 |
GT‐5_16‐8‐2018_COI | 200,655 | 134 | 144,174 | 98 | 15.66 | 72 |
GT‐6_16‐8‐2018_COI | 142,747 | 142 | 99,940 | 162 | 14.57 | 68.85 |
WP‐1_22‐8‐18_COI | 263,437 | 157 | 143,486 | 347 | 4.13 | 69.94 |
WP‐2_22‐8‐18_COI | 330,301 | 160 | 225,989 | 321 | 0.45 | 68.26 |
WP‐3_22‐8‐18_COI_ | 276,045 | 205 | 103,801 | 452 | 3.7 | 66.22 |
WP‐4_22‐8‐18_COI | 267,173 | 139 | 177,975 | 393 | 3.37 | 69.25 |
WP‐5_22‐8‐18_COI | 256,504 | 158 | 191,390 | 239 | 1.34 | 71.55 |
WP‐6_22‐8‐18_COI | 243,309 | 121 | 123,239 | 82 | 3.56 | 76.1 |
BA‐1_24‐8‐18_COI | 145,523 | 72 | 62,197 | 387 | 14.63 | 66.75 |
BA‐2_24‐8‐18_COI | 212,628 | 88 | 151,481 | 313 | 7.74 | 71.34 |
BA‐3_24‐8‐18_COI | 115,902 | 63 | 13,586 | 469 | 23.08 | 62.55 |
BA‐4_24‐8‐18_COI | 102,571 | 89 | 69,278 | 277 | 7.83 | 69.16 |
BA‐5_24‐8‐18_COI | 188,706 | 89 | 129,043 | 312 | 8.02 | 69.69 |
BA‐6_24‐8‐18_COI | 133,081 | 60 | 58,736 | 339 | 12.07 | 67.85 |
TO‐1_28‐8‐2018_COI | 175,589 | 105 | 139,710 | 179 | 1.7 | 71.14 |
TO‐2_28‐8‐2018_COI | 167,549 | 112 | 100,841 | 271 | 9.11 | 68.75 |
TO‐3_28‐8‐2018_COI | 189,358 | 103 | 120,406 | 356 | 1.51 | 68.69 |
TO‐4_28‐8‐2018_COI | 167,074 | 106 | 145,180 | 160 | 1.44 | 69.33 |
TO‐5_28‐8‐2018_COI | 231,638 | 112 | 189,424 | 224 | 4.32 | 72.79 |
TO‐6_28‐8‐2018_COI | 230,869 | 112 | 181,460 | 102 | 10.65 | 71.69 |