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Scatter plots showing genotype calls for the single-nucleotide polymorphism (SNP) assay sets P002, P101, and P118 from the Fluidigm EP1TM assay. Colored dots indicate SNP marker genotypes of the 280 cucumber accessions (A) and 95 commercial F1 hybrid cultivars (B). Red, blue, and green dots indicate XX (homozygote), YY (homozygote), and XY (heterozygote) genotypes, respectively. Gray and black dots indicate no call and no template control (NTC), respectively.
