Table 1. The performance of CNN and CNN + LSTM based on 6mA-rice-Lv dataset under different CNN layers and kernel sizes.
Model | CNN layers | Kernel size | SP (%) | SN (%) | ACC (%) | MCC | AUC | |
---|---|---|---|---|---|---|---|---|
CNN | 1-256-5 | 1 | 5 | 65.37 | 72.81 | 69.09 | 0.38 | 0.76 |
1-256-8 | 1 | 8 | 84.00 | 65.56 | 74.78 | 0.51 | 0.84 | |
1-256-10 | 1 | 10 | 83.73 | 69.34 | 76.53 | 0.54 | 0.86 | |
1-256-16 | 1 | 16 | 79.95 | 86.85 | 83.40 | 0.67 | 0.91 | |
2-256-5 | 2 | 5 | 80.94 | 83.87 | 82.41 | 0.65 | 0.90 | |
2-256-8 | 2 | 8 | 70.33 | 94.13 | 82.23 | 0.67 | 0.92 | |
2-256-10 | 2 | 10 | 80.21 | 96.97 | 88.59 | 0.78 | 0.97 | |
2-256-16 | 2 | 16 | 91.98 | 94.53 | 93.26 | 0.87 | 0.98 | |
3-256-5 | 3 | 5 | 66.39 | 93.94 | 80.17 | 0.63 | 0.91 | |
3-256-8 | 3 | 8 | 82.14 | 96.89 | 89.52 | 0.80 | 0.97 | |
3-256-10 | 3 | 10 | 86.19 | 97.09 | 91.64 | 0.84 | 0.97 | |
3-256-16 | 3 | 16 | 86.88 | 96.85 | 91.86 | 0.84 | 0.98 | |
CNN +LSTM | 1-256-5-32 | 1 | 5 | 71.86 | 88.13 | 80.00 | 0.61 | 0.88 |
1-256-8-32 | 1 | 8 | 89.82 | 95.02 | 92.42 | 0.85 | 0.97 | |
1-256-10-32 | 1 | 10 | 91.39 | 95.33 | 93.36 | 0.87 | 0.98 | |
1-256-16-32 | 1 | 16 | 91.91 | 94.93 | 93.42 | 0.87 | 0.98 | |
2-256-5-32 | 2 | 5 | 86.73 | 91.80 | 89.26 | 0.79 | 0.95 | |
2-256-8-32 | 2 | 8 | 92.63 | 94.67 | 93.65 | 0.87 | 0.98 | |
2-256-10-32 | 2 | 10 | 92.57 | 94.70 | 93.63 | 0.87 | 0.98 | |
2-256-16-32 | 2 | 16 | 92.19 | 95.11 | 93.65 | 0.87 | 0.98 | |
3-256-5-32 | 3 | 5 | 88.67 | 92.76 | 90.72 | 0.82 | 0.96 | |
3-256-8-32 | 3 | 8 | 92.49 | 93.56 | 93.03 | 0.86 | 0.97 | |
3-256-10-32 | 3 | 10 | 93.33 | 94.03 | 93.68 | 0.87 | 0.98 | |
3-256-16-32 | 3 | 16 | 93.09 | 94.55 | 93.82 | 0.88 | 0.98 |