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. 2021 Feb 18;17(2):e1008767. doi: 10.1371/journal.pcbi.1008767

Table 1. The performance of CNN and CNN + LSTM based on 6mA-rice-Lv dataset under different CNN layers and kernel sizes.

Model CNN layers Kernel size SP (%) SN (%) ACC (%) MCC AUC
CNN 1-256-5 1 5 65.37 72.81 69.09 0.38 0.76
1-256-8 1 8 84.00 65.56 74.78 0.51 0.84
1-256-10 1 10 83.73 69.34 76.53 0.54 0.86
1-256-16 1 16 79.95 86.85 83.40 0.67 0.91
2-256-5 2 5 80.94 83.87 82.41 0.65 0.90
2-256-8 2 8 70.33 94.13 82.23 0.67 0.92
2-256-10 2 10 80.21 96.97 88.59 0.78 0.97
2-256-16 2 16 91.98 94.53 93.26 0.87 0.98
3-256-5 3 5 66.39 93.94 80.17 0.63 0.91
3-256-8 3 8 82.14 96.89 89.52 0.80 0.97
3-256-10 3 10 86.19 97.09 91.64 0.84 0.97
3-256-16 3 16 86.88 96.85 91.86 0.84 0.98
CNN +LSTM 1-256-5-32 1 5 71.86 88.13 80.00 0.61 0.88
1-256-8-32 1 8 89.82 95.02 92.42 0.85 0.97
1-256-10-32 1 10 91.39 95.33 93.36 0.87 0.98
1-256-16-32 1 16 91.91 94.93 93.42 0.87 0.98
2-256-5-32 2 5 86.73 91.80 89.26 0.79 0.95
2-256-8-32 2 8 92.63 94.67 93.65 0.87 0.98
2-256-10-32 2 10 92.57 94.70 93.63 0.87 0.98
2-256-16-32 2 16 92.19 95.11 93.65 0.87 0.98
3-256-5-32 3 5 88.67 92.76 90.72 0.82 0.96
3-256-8-32 3 8 92.49 93.56 93.03 0.86 0.97
3-256-10-32 3 10 93.33 94.03 93.68 0.87 0.98
3-256-16-32 3 16 93.09 94.55 93.82 0.88 0.98