Antibodies |
Rabbit anti-CASPR |
A gift from Elior Peles, Weizmann Institute. (Peles et al., 1997) |
#A6061 RRID:AB_231422 0 |
Mouse anti-APC (CC-1) |
Millipore |
Millipore Cat# OP80, RRID:AB_2057371 |
Mouse anti-CD-68 |
Dako (Agilent) |
Agilent Cat# M0814, RRID:AB_2314148 |
Rabbit anti-CD206 |
Proteintech |
Cat# 18704–1-AP RRID:AB_105972 32 |
Goat anti-Choline Acetyltransferase (ChAT) |
Millipore |
Millipore Cat# AB144P, RRID:AB_2079751 |
Rat anti-mouse F4/80 |
Bio-Rad |
Bio-Rad Cat# MCA497GA, RRID:AB_323806 |
Chicken anti-GALC |
A gift from Chris Lee and Christopher Eckman. (Lee et al., 2010) |
CL1021AP |
Rabbit anti-GAPDH |
Sigma-Aldrich |
Sigma-Aldrich Cat# G9545, RRID:AB_796208 |
Rat anti-HA High Affinity |
Roche |
Roche Cat# 11867423001, RRID:AB_390918 |
Anti-HA-Peroxidase, High Affinity |
Roche |
Roche Cat# 12013819001, RRID:AB_390917 |
Rabbit anti-IBA1 (for immunocytochemistry) |
Wako Chemicals |
Cat# 019–19741 RRID:AB_839504 |
Rabbit anti-Kv1.1 (KCNA1) |
Alomone Labs |
Cat# APC-009, RRID:AB_204014 4 |
Rabbit anti-LAMP-1 |
Abeam |
Abcam Cat# ab24170, RRID:AB_775978 |
Chicken anti-MPZ |
Aves |
Aves Labs Cat# PZO, RRID:AB_2313561 |
Rabbit anti-MPZ |
Abeam |
Abcam Cat# ab31851, RRID:AB_2144668 |
Mouse anti-Nav1.6 clone K87A/10 |
UC Davis / NeuroMab |
RRID:MMRRC_06 5966-UCD |
Mouse anti-Pan-Neurofascin L11A/41 |
Millipore |
Millipore Cat# MABN621 RRID: AB_10672370 |
Anti-galactocerebroside (O1) |
A gift from Pablo Paez, SUNY Buffalo. (Sommer and Schachner, 1981) |
O1 Hybridoma |
Rabbit anti-human OLIG2 |
Proteintech |
Proteintech Cat# 13999–1-AP, RRID:AB_2157541 |
Rabbit anti-PMP2 |
Proteintech |
Proteintech Cat# 12717–1-AP, RRID:AB_2166978 |
Rabbit anti-PU.1 (Spi-1) (T-21) |
Santa Cruz |
Santa Cruz Biotechnology Cat# sc-352, RRID:AB_632289 |
Mouse anti-Tubulin β3 (Tuj1) |
Biolegend |
Covance Cat# MMS-435P, RRID:AB_2313773 |
Rabbit anti-β-Tubulin |
Novus |
Novus Cat# NB600–936, RRID:AB_1000065 6 |
Brilliant Violet 711 anti-mouse/human CD11b antibody (M1/70) |
BioLegend |
Cat# 101241 RRID:AB_112187 91 |
PE anti-mouse Ly-6G antibody (1A8) |
BioLegend |
Cat# 127607 RRID:AB_118610 4 |
APC anti-mouse F4/80 antibody (BM8) |
BioLegend |
Cat# 123115 RRID:AB_ 893493 |
PE/Cy7 anti-mouse Ly-6C antibody (HK1.4) |
BioLegend |
Cat# 128017 RRID:AB_ 1732093 |
FITC Hamster Anti-Mouse CD11C (HL3) |
BD PharMingen |
Cat# 553801 RRID:AB_395060 |
APC/Cy7 anti-mouse CD86 antibody (GL-1) |
BioLegend |
Cat# 105029 RRID: AB_2074993 |
PerCP anti-mouse I-A/I-E antibody (M5/114.15.2) |
BioLegend |
Cat# 107623 RRID: AB_893586 |
Brilliant Violet 510 anti-mouse/human CD11b antibody (M1/70) |
BioLegend |
Cat# 101245 RRID:AB_256139 0 |
APC/Cyanine7 anti-mouse F4/80 antibody (BM8) |
BioLegend |
Cat# 123117 RRID: 893489 |
iNOS Monoclonal antibody (CXNFT), APC, eBioscience |
Thermo Fisher Scientific |
Cat#17-5920-82 RRID:AB_257324 4 |
Human/Mouse Arginase 1/ARG1 Fluorescein- conjugated antibody |
R&D Systems |
Cat#IC5868F RRID:AB_107181 18 |
PE/Cy7 anti-mouse CD206 (MMR) antibody (C068C2) |
BioLegend |
Cat# 141719 RRID:AB_256224 7 |
EGR2 Monoclonal Antibody (erongr2), PE, eBioscience |
Thermo Fisher Scientific |
Cat# 12-6691-82 RRID:AB_107178 04 |
Brilliant Violet 711 anti-mouse TNF-α antibody (MP6-XT22) |
BioLegend |
Cat# 506349 RRID:AB_262980 0 |
Brilliant Violet 421 anti-human IL-10 antibody (JES3–9D7) |
BioLegend |
Cat# 501421 RRID:AB_108969 47 |
PerCP/Cy5.5 anti-mouse IL-12/IL-23 p40 (monomer, dimer, heterodimer) antibody (C15.6) |
BioLegend |
Cat# 505211 RRID:AB_256622 4 |
TruStain FcX (anti-mouse CD16/32) antibody (93) |
BioLegend |
Cat#101319 RRID:AB_157497 3 |
Alexa Fluor 488-AffiniPure F(ab’)2 Fragment Donkey anti-Chicken IgY |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 703-546-155, RRID:AB_2340376 |
Rhodamine Red-X-AffiniPure Donkey Anti-Rabbit IgG |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 711-295-152, RRID:AB_2340613 |
Alexa Fluor 647 AffiniPure F(ab’)2 Fragment Donkey Anti-Rabbit IgG |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 711-606-152, RRID:AB_2340625 |
Goat anti-Mouse lgG2b Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 |
Thermo Fisher Scientific |
Thermo Fisher Scientific Cat# A- 21145, RRID:AB_2535781 |
Alexa Fluor 594-AffiniPure Goat Anti-Mouse IgG, Fc subclass 2a Specific antibody |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 115-585-206, RRID:AB_2338886 |
Cy3-AffiniPure Donkey Anti-Goat IgG (H+L) antibody |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 705-165-003, RRID:AB_2340411 |
Alexa Fluor 488-AffiniPure Donkey Anti-Rat IgG antibody |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 712-545-153, RRID:AB_2340684 |
Rhodamine (TRITC)-AffiniPure Donkey Anti-Rat IgG antibody |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 712-025-153, RRID:AB_2340636 |
Donkey Anti-Rabbit Rabbit IgG (H+L) Polyclonal, HRP-Conjugated antibody |
Novus |
Novus Cat# NB 7185, RRID:AB_524677 |
Peroxidase-AffiniPure Donkey Anti-Chicken IgY (IgG) antibody |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 703-035-155, RRID:AB_1001528 3 |
Peroxidase-AffiniPure Goat Anti-Rat IgG, Light Chain Specific |
Jackson ImmunoResearch Labs |
Jackson ImmunoResearch Labs Cat# 112-035-175, RRID:AB_2338140 |
Goat anti-Mouse IgM, mu chain, FITC conjugate antibody, Millipore |
Millipore |
Millipore Cat# AP128F, RRID:AB_1121579 1 |
Bacterial and Virus Strains |
DH5a |
Thermo Fisher Scientific |
Catalog number: 1825801 2 |
Biological Samples |
Mouse Nerve RNA |
This paper |
N/A |
Mouse Schwann cell RNA |
This paper |
N/A |
Mouse BMDM RNA |
This paper |
N/A |
Chemicals, Peptides, and Recombinant Proteins |
2,2,2-tribromoethanol (avertin) |
Millipore Sigma |
Cat#T48402
|
4-methylumbelliferone β-D-galactopyranoside |
Sigma-Aldrich |
Cat#M1633 |
4-methylumbelliferone sodium salt |
Sigma-Aldrich |
Cat#M1508 |
Amicon Ultra-15 |
Fisher Scientific |
Cat#UFC901024 |
C8 galactosyl ceramide |
Avanti Polar Lipids |
Cat#860538P |
Diethyl pyrocarbonate (DEPC) |
Fisher Scientific |
Cat#FERR0601 |
D-Mannose 6-phosphate |
Sigma-Aldrich |
Cat#M6876 |
DNA 100bp ladder |
Goldbiotechnology |
Cat#D001–2500 |
Pierce ECL Western Blotting |
Thermo Fisher Scientific |
Cat#32106 |
Pierce ECL Plus Western Blotting |
Thermo Fisher Scientific |
Cat#32132 |
GE Healthcare Amersham |
Fisher Scientific |
Cat#45-001-507PM |
HisPur Cobalt Resin |
Thermo Fisher Scientific |
Cat#89964 |
Imidazole |
Millipore Sigma |
Cat#T6330 |
β-Mercaptoethanol |
Sigma-Aldrich |
Cat#M6250 |
Phosphatase Cocktail 2 |
Sigma-Aldrich |
Cat#P5726 |
Phosphatase Cocktail 3 |
Sigma-Aldrich |
Cat#P0044 |
PMSF |
Sigma-Aldrich |
Cat#45-P7626 |
Precision Plus Protein Dual Color Standards |
Bio-Rad |
Cat#161–0394 |
Psychosine (Galactosyl Sphingosine, d18:1) |
Avanti Polar Lipids |
Cat#860537P |
Deuterated Psychosine Quantitative Mass Spec Standard |
Avanti Polar Lipids |
Cat#330714W |
Saponin |
Sigma-Aldrich |
Cat#47036 |
Thermo Scientific Pierce Tissue Strainers (250 microns) |
Fisher Scientific |
Cat#87791 |
Vectashield Antifade Mounting Medium |
Vector Labs |
Cat#H-1000 |
Vetabond reagent for tissue section (TESPA) |
Vector Labs |
Cat#SP-1800 |
B27 Supplement |
Thermo Fisher Scientific |
Cat#17504–044 |
Collagen |
Corning |
Cat#354236 |
Collagenase type I |
Fischer Scientific |
Cat#NC9633623 |
Dispase II |
Sigma-Aldrich |
Cat#D4693 |
Forskolin |
EMD Millipore |
Cat#344270 |
Human Recombinant Laminin 211 |
Biolamina |
Cat#LN211–03 |
Lipofectamine 3000 |
Thermo Fisher Scientific |
Cat#L3000008 |
Recombinant Human Nrg1-β1 |
R&D Systems |
Cat#396-HB-050 |
Recombinant Mouse M-CSF |
Biolegend |
Cat#576404 |
RPMI-1640 medium |
Thermo Fisher Scientific |
Cat#21870076 |
Nerve Growth Factor NGF |
Envigo |
Cat#BT.5017 |
Opti-MEM |
Thermo Fisher Scientific |
Cat#11058–021 |
Critical Commercial Assays |
Cell counting kit-8 |
Dojindo |
Cat#CK04–05 |
Cholesterol Assay Kit (aka Filipin) |
Abeam |
Cat#Ab133116
|
Fixation/Permeabilization Solution Kit |
BD Cytofix/Cytoperm |
Cat#554714 |
Reverse Transcriptase (superscript III Kit) |
Thermo Fisher Scientific |
Cat#18080–051 |
Taqman Gene Expression Assay: 18S (Hs99999901_s1) |
Thermo Fisher Scientific |
Cat#4331182 |
Taqman Gene Expression Assay: Ddit3/CHOP (Mm00492097_m1) |
Thermo Fisher Scientific |
Cat#4331182 |
Taqman Gene Expression Assay: XBP1 (Mm03464496_m1) |
Thermo Fisher Scientific |
Cat#4331182 |
Taqman Gene Expression Assay: HSPa5/BiP (Hs99999174_m1) |
Thermo Fisher Scientific |
Cat#4331182 |
Taqman Gene Expression Assay: MRC1/CD206 (Mm01329362_m1) |
Thermo Fisher Scientific |
Cat#4331182 |
Experimental Models: Cell Lines |
Human: Dermal Fibroblasts |
Telethon biobank (Shin et al., 2016) |
N/A |
Mouse: Primary Schwann cells |
This paper |
N/A |
Mouse: Primary bone marrow derived macrophages |
This paper |
N/A |
Mouse: Primary embryonic fibroblasts |
This paper |
N/A |
Experimental Models: Organisms/Strains |
Mouse: B6.C-Tg(GALCfl/fl) |
This paper. (Weinstock et al., 2020) |
N/A |
Mouse: B6.CE-Galctwi/J |
The Jackson Laboratory |
Cat#000845 |
Mouse: B6.C-Tg(CMV-cre)1Cgn/J |
The Jackson Laboratory |
Cat#006054 |
Mouse: B6N.FVB-Tg(Mpz-cre)26Mes/J (aka PO Cre) |
The Jackson Laboratory |
Cat#017927 |
Mouse: B6.129P2-Lyz2tm1(cre)Ifo/J (aka LysM Cre) |
The Jackson Laboratory |
Cat#004781 |
Mouse: B6;129S6-Gt(ROSA)26Sortm14(CAG-dTomato)Hze/J (aka tdTomato) |
The Jackson Laboratory |
Cat#007908 |
Mouse: B6.Cg-Tg(Thy1-YFP)HJrs/J |
The Jackson Laboratory |
Cat# 003782 |
Mouse: ATF3-GFP |
Y.-C.C. and C. Woolf unpublished data |
N/A |
Oligonucleotides |
Primers for qPCR, See Table S2
|
This paper |
N/A |
Primers for cloning hGALC-6xHis-HA, see Table S2
|
This paper |
N/A |
Recombinant DNA |
hGALC-HA |
(Shin et al., 2016)) |
N/A |
hGALC-6xHis-HA |
This paper |
N/A |
Software and Algorithms |
ImageJ |
(Schneider et al., 2012) |
https://imagej.net/Welcome |
Graph Pad Prism 7 |
GraphPad |
Graphpad.com |