Table 3.
Top ten genes enriched with SNPs signals (MAGMA).
Symbol | Chr | Start | Stop | ZStat | P value | FDR |
---|---|---|---|---|---|---|
PHGDH | 1 | 120202421 | 120286838 | 9.07 | 5.76 × 10−20 | 1.06 × 10−15 |
HMGCS2 | 1 | 120290619 | 120311528 | 6.17 | 3.39 × 10−10 | 3.13 × 10−06 |
REEP3 | 10 | 65281123 | 65384883 | 5.97 | 1.20 × 10−09 | 7.42 × 10−06 |
SLC6A20 | 3 | 45796942 | 45838027 | 5.74 | 4.82 × 10−09 | 2.23 × 10−05 |
TTC39B | 9 | 15163620 | 15307358 | 5.28 | 6.58 × 10−08 | 2.43 × 10−04 |
GCKR | 2 | 27719709 | 27746554 | 4.96 | 3.56 × 10−07 | 1.10 × 10−03 |
DCDC1 | 11 | 30851916 | 31391357 | 4.79 | 8.54 × 10−07 | 2.25 × 10−03 |
ZAP70a | 2 | 98330023 | 98356325 | 4.76 | 9.73 × 10−07 | 2.25 × 10−03 |
MXRA7 | 17 | 74668633 | 74707098 | 4.73 | 1.10 × 10−06 | 2.26 × 10−03 |
PSPH | 7 | 56078744 | 56119297 | 4.71 | 1.23 × 10−06 | 2.28 × 10−03 |
Top ten genes enriched with SNPs signals (MAGMA). aLies outside the MacTel-associated loci.