Table 2.
Performance of type 2 diabetes risk models via various classifiers.
| Classifier | Prediction modela | Discrimination | BS | NRI (95% CI)c % | |
|---|---|---|---|---|---|
| AUC (95% CI) | ΔAUC (95% CI)b | ||||
| CPH | Conventional model | 0.815 (0.795 to 0.833) | - | 0.053 | - |
| Conventional + GRS model | 0.815 (0.796 to 0.833) | 0.001 (−0.009 to 0.010) | 0.133 | 41.2 (27.8 to 54.1) | |
| ANN | Conventional model | 0.816 (0.797 to 0.834) | - | 0.044 | |
| Conventional + GRS model | 0.818 (0.799 to 0.836) | 0.002 (−0.015 to 0.019) | 0.045 | 41.0 (25.1 to 52.7) | |
| RF | Conventional model | 0.843 (0.825 to 0.860) | - | 0.041 | - |
| Conventional + GRS model | 0.861 (0.844 to 0.877) | 0.018 (0.002 to 0.034) | 0.040 | 46.4 (35.2 to 57.6) | |
| GBM | Conventional model | 0.851 (0.834 to 0.868) | - | 0.033 | - |
| Conventional + GRS model | 0.885 (0.869 to 0.899) | 0.033 (0.001 to 0.065) | 0.033 | 45.1 (18.0 to 57.7) | |
Bold values represent P < 0.05. CPH, Cox proportional hazards regression model; ANN, artificial neural network; RF, random forest; GBM, gradient boosting machine; GRS, genetic risk score; AUC, the area under receiver operating characteristic curve; BS, brier score; NRI, net reclassification improvement; CI, confidence interval.
Conventional model included FPG, WC, TG, parental history of diabetes, and hypertension.
ΔAUCs were the differences of AUCs among conventional-genetic-combined models and conventional model.
NRI showed the reclassification of the prediction models with genetic risk scores compared to conventional model.