Table 2 -. Differentially expressed proteins into the “Cancer” and “Breast cancer” annotations according to the Ingenuity Pathways Knowledge Base (IPA v. 2.3).

Disease	FDR-adjusted p-value	Gene symbol
Cancer	3.24E-06	A1BG, ABHD14B, ACAA2, ACACB, ACADM, ACADS, ACADSB, ACO1, ACOT1, ACSL1, AEBP1, AFM, AGR2, AGT, AHSG, ALDH1A1, ALDH2, ALDH6A1, ALDOA, ANXA3, AP1G1, APOB, APOD, APOE, ARCN1, ASPH, ASS1, BLVRB, BPGM, C1S, C5, CA1, CA2, CACYBP, CALB2, CAND1, CAPG, CAT, CAV1, CAVIN1, CAVIN3, CBX3, CD36, CES1, CFH, CKAP4, CKB, CLEC3B, CNN1, COL12A1, COL18A1, COPB1, COPG1, CPA3, CRABP2, CRYAB, CSE1L, CSTA, CTSD, CYB5R1, DDX17, DDX39B, DDX5, DHRS2, DHX15, DPP3, DSP, ECHS1, ECI1, EEF1D, EFHD1, EFTUD2, EHD2, ETFB, EZR, F2, FABP4, FAH, FASN, FBL, FBN1, FGG, FKBP4, FMOD, FN1, GAPDH, GARS, GDI1, GLUL, GOT2, GPD1, GPD2, GPX3, H1F0, H2AFY, HADH, HBD, HDLBP, HIST1H1E, HNRNPA2B1, HNRNPAB, HNRNPD, HNRNPK, HNRNPL, HNRNPM, HNRNPR, HNRNPU, HP, HRG, HSP90AA1, HSP90AB1, HSPA12A, HSPA5, HSPA8, HSPA9, HSPB1, HSPD1, HSPG2, HSPH1, HYOU1, IGFALS, ILF2, ILF3, ILK, ITIH4, KHDRBS1, KNG1, KRT18, KTN1, LAMC1, LBP, LDHB, LMAN2, LMNB1, LRG1, LRP1, LRPPRC, LRRC59, LTF, MAOA, MCAM, MCCC2, MDH2, ME1, MTHFD1, MYH11, MYH9, MYO1C, NID2, NNMT, NNT, NONO, NPM1, NSF, NUMA1, OGN, ORM1, P4HB, PARP1, PARVA, PCBP1, PCYOX1, PDHA1, PDIA3, PGM1, PHB, PHGDH, PKM, PLG, PLIN1, PLIN4, PON1, POSTN, PRDX1, PRDX2, PRELP, PRKAR2B, PRKDC, PRPF8, PSME1, PSME2, PTBP1, PTGIS, RBMX, RBP4, RETSAT, RNPEP, RPL13, RPL18, RPL3, RPL4, RPL6, RPL7A, RPS9, RRBP1, RTCB, RUVBL2, SELENBP1, SERPIND1, SERPINF2, SLC25A1, SLC4A1, SLC9A3R1, SNRNP200, SORBS1, SORD, SPTBN1, SRSF2, SRSF6, SRSF7, STAT1, SYNCRIP, THBS1, TNC, TNS1, TNXB, TRAP1, TTLL12, TUBB, TUBB4B, TYMP, U2AF2, UGDH, UGP2, VARS
Breast cancer	1.00E-06	ACAA2, ACACB, ACOT1, AGR2, AGT, ALDH1A1, ALDOA, APOB, APOE, CAV1, CBX3, CES1, CKAP4, CKB, CNN1, COL12A1, CRABP2, CRYAB, CSE1L, CTSD, DDX39B, DHRS2, DHX15, DSP, EFTUD2, FASN, FBN1, FN1, GLUL, H2AFY, HNRNPM, HNRNPR, HP, HSP90AA1, HSP90AB1, HSPA5, HSPB1, HSPD1, HSPG2, ILF2, ILF3, ITIH4, KRT18, LBP, LRP1, LTF, MCAM, MYH11, MYH9, NID2, OGN, ORM1, P4HB, PARP1, PARVA, PCYOX1, PHB, PKM, PLG, POSTN, PRDX2, PRKDC, RBMX, RPL4, RTCB, SLC4A1, SLC9A3R1, STAT1, THBS1, TNC, TNS1, TNXB, TUBB, TUBB4B, TYMP, U2AF2, UGDH