Table 3. Affinities of ATG8 domains for the integrin β3 peptide.
KI values for ATG8 domains calculated from displacement experiments using unphosphorylated integrin β3 peptide and phosphorylated peptides (pThr777, pSer778, pThr779, pTyr785, or pThr779 pTyr785). Indicated error is the error of the mean (SEM); n = 3 replicates. N.B., no or low affinity (KI > 100 μM); N.M., not measured.
| Peptide sequences | KI values ± SEM (μM) | ||||
|
MAP1LC3A ATG8 |
MAP1LC3B ATG8 |
MAP1LC3C ATG8 |
GABARAPL2 ATG8 |
GABARAP ATG8 |
|
| Unphosphorylated CH3CO- KEATSTFTNITYRG-NH2 |
N.B. | N.B. | N.B. | N.B. | N.B. |
| pThr777 CH3CO- KEApTSTFTNITYRG-NH2 |
N.B. | N.B. | 73 ± 4 | N.M. | 47 ± 3 |
| pSer778 CH3CO- KEATpSTFTNITYRG-NH2 |
29.4 ± 0.5 | N.B. | 16.1 ± 0.5 | 80 ± 5 | N.M. |
| pThr779 CH3CO- KEATSpTFTNITYRG-NH2 |
N.B. | N.B. | 82 ± 3 | N.B. | N.M. |
| pTyr785 CH3CO- KEATSTFTNITpYRG-NH2 |
38 ± 2 | 81 ± 2 | 83 ± 4 | 89 ± 12 | N.M. |
| pThr779/pTyr785 CH3CO- KEATSpTFTNITpYRG-NH2 |
8.5 ± 0.5 | 15 ± 1 | 8 ± 2 | N.M. | 17.8 ± 0.8 |